RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 MTMR3Q13615 1198 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 LZTS2Q9BRK4 669 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 GKAP1Q5VSY0 366 aaPredicted RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 UBLCP1Q8WVY7 318 aaPredicted RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 ERO1AQ96HE7 468 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 ABCA5Q8WWZ7 1642 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 TRMT1LQ7Z2T5 733 aaKnown RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 VEZTQ9HBM0 779 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 PICALMQ13492 652 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 RAB3GAP1Q15042 981 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 TEKT1Q969V4 418 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 ZMAT2Q96NC0 199 aaKnown RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 PAG1Q9NWQ8 432 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 ANKRD12Q6UB98 2062 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 WDR46O15213 610 aaKnown RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 CLNS1AP54105 237 aaKnown RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 SDCCAG8Q86SQ7 713 aaPredicted RBP9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 ABCC5O15440 1437 aa9.9□□□□□ -0.82
SHROOM4-203ENST00000460112 SSFA2P28290 1259 aa9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 HAND2P61296 217 aa9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 MCUR1Q96AQ8 359 aa9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 ZKSCAN3Q9BRR0 538 aa9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 KRT3P12035 628 aa9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 PPANQ9NQ55 473 aaKnown RBP9.9□□□□□ -0.83
SHROOM4-203ENST00000460112 SPOPO43791 374 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 DNM2P50570 870 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 P3H4Q92791 437 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 TPCN1Q9ULQ1 816 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 TRAPPC8Q9Y2L5 1435 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 GOLGA8QA0A0J9YX86 632 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 GOLGA8OA6NCC3 632 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 GOLGA8NF8WBI6 632 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 NR1I2O75469 434 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 UTP14CQ5TAP6 766 aaKnown RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 CCDC25Q86WR0 208 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 MIS12Q9H081 205 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 PARP2Q9UGN5 583 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 WHAMMP3Q1A5X7 153 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 IFT20Q8IY31 132 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 NUP58Q9BVL2 599 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 DNAI1Q9UI46 699 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 NOP56O00567 594 aaKnown RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 RBBP5Q15291 538 aaKnown RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 GBP7Q8N8V2 638 aaPredicted RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 ZNF277Q9NRM2 450 aaPredicted RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 PNMA2Q9UL42 364 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 IVNS1ABPQ9Y6Y0 642 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 ZNF365Q70YC5 407 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 PANK2Q9BZ23 570 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 ARID5AQ03989 594 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 MCM6Q14566 821 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 TTF2Q9UNY4 1162 aaKnown RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 MAST1Q9Y2H9 1570 aa9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 TCOF1Q13428 1488 aaKnown RBP9.89□□□□□ -0.83
SHROOM4-203ENST00000460112 RUFY4Q6ZNE9 571 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 BUB1BO60566 1050 aaPredicted RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 ZNF853P0CG23 659 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 ARHGEF11O15085 1522 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 MYH9P35579 1960 aaKnown RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 RNF113AO15541 343 aaKnown RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 SLC12A2P55011 1212 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 CYP26C1Q6V0L0 522 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 FCHSD1Q86WN1 690 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 DCAF17Q5H9S7 520 aaPredicted RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 PSPC1Q8WXF1 523 aaKnown RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 HAUS1Q96CS2 278 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 IQSEC3Q9UPP2 1182 aaPredicted RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 TRIM27P14373 513 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 NT5C2P49902 561 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 IFT81Q8WYA0 676 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 DENND2AQ9ULE3 1009 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 GUCA1BQ9UMX6 200 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 BCRP11274 1271 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 AOPEPQ8N6M6 819 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 ZC3H12CQ9C0D7 883 aaKnown RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
SHROOM4-203ENST00000460112 TRIML1Q8N9V2 468 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 BRF1Q92994 677 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 ZSWIM4Q9H7M6 989 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PDE6BP35913 854 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 UAP1Q16222 522 aaPredicted RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 Q6ZUG5 572 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 KRT28Q7Z3Y7 464 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 SPC25Q9HBM1 224 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 MCM7P33993 719 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 ZNF445P59923 1031 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 DHX58Q96C10 678 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 RIOK1Q9BRS2 568 aaKnown RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 ATF7P17544 494 aaPredicted RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PTGS1P23219 599 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms