RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CHRNA5P30532 468 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 GRIK5Q16478 980 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 EIF6P56537 245 aaKnown RBP10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 ZNF274Q96GC6 653 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 USP28Q96RU2 1077 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 A0A087WWV3 80 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 ISM2Q6H9L7 571 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 LEO1Q8WVC0 666 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 ZNF396Q96N95 335 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 NUP62CLQ9H1M0 184 aa10.89□□□□□ -0.67
NUDCD3-203ENST00000460110 TNKSO95271 1327 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 CDKL5O76039 1030 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 CDC27P30260 824 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 EZH2Q15910 746 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 NSUN4Q96CB9 384 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 CD209Q9NNX6 404 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 PPEF1O14829 653 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 CATIPQ7Z7H3 387 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 KIAA0825Q8IV33 1275 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 DRC7Q8IY82 874 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 NBPF3Q9H094 633 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 RFX7Q2KHR2 1363 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 MPHOSPH10O00566 681 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 ADRA2BP18089 450 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 PDE4BQ07343 736 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 TCP10Q12799 353 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 SH3RF3Q8TEJ3 882 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 PLCH1Q4KWH8 1693 aa10.88□□□□□ -0.67
NUDCD3-203ENST00000460110 SH2B2O14492 632 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 KINO60870 393 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 TM4SF1P30408 202 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 ZMYND15Q9H091 742 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 PODXL2Q9NZ53 605 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 V9GY48 417 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 LDHCP07864 332 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 CACNB3P54284 484 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 TFAP4Q01664 338 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 SPECC1Q5M775 1068 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 HOMER1Q86YM7 354 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 NAP1L5Q96NT1 182 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 POLLQ9UGP5 575 aa10.87□□□□□ -0.67
NUDCD3-203ENST00000460110 A0A1B0GVL5 298 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 BIN1O00499 593 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 TSPY3P0CV98 308 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 TSPY8P0CW00 308 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 BTDP43251 543 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 LRSAM1Q6UWE0 723 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 ZNF654Q8IZM8 581 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 USP25Q9UHP3 1055 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 TTF2Q9UNY4 1162 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 H0YIN7 160 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 BBOX1O75936 387 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 KRT40Q6A162 431 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 LLPHQ9BRT6 129 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 ZSCAN16Q9H4T2 348 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 PDILTQ8N807 584 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 PDGFDQ9GZP0 370 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 DCP1AQ9NPI6 582 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 GLI3P10071 1580 aa10.86□□□□□ -0.67
NUDCD3-203ENST00000460110 FDPSP14324 419 aaKnown RBP10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 SPC24Q8NBT2 197 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 TBC1D16Q8TBP0 767 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 LAMB4A4D0S4 1761 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 SHANK3Q9BYB0 1731 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 NR1I2O75469 434 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 CPVLQ9H3G5 476 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 LY9Q9HBG7 655 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 HPS5Q9UPZ3 1129 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 USP17L3A6NCW0 530 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 USP17L4A6NCW7 530 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 GUCY1A2P33402 732 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 CLEC17AQ6ZS10 378 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 USP17L1Q7RTZ2 530 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 FBXO18Q8NFZ0 1043 aa10.85□□□□□ -0.67
NUDCD3-203ENST00000460110 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms