RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 ZNF408Q9H9D4 720 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 PCDHB14Q9Y5E9 798 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 SNCAIPQ9Y6H5 919 aa8.37□□□□□ -1.07
CCDC50-203ENST00000460064 DLGAP3O95886 979 aa8.36□□□□□ -1.07
CCDC50-203ENST00000460064 EIF6P56537 245 aaKnown RBP8.36□□□□□ -1.07
CCDC50-203ENST00000460064 CLCQ05315 142 aa8.36□□□□□ -1.07
CCDC50-203ENST00000460064 TRIM28Q13263 835 aaKnown RBP8.36□□□□□ -1.07
CCDC50-203ENST00000460064 WIPI1Q5MNZ9 446 aaPredicted RBP8.36□□□□□ -1.07
CCDC50-203ENST00000460064 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
CCDC50-203ENST00000460064 CKAP2LQ8IYA6 745 aa8.36□□□□□ -1.07
CCDC50-203ENST00000460064 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
CCDC50-203ENST00000460064 PLPPR2Q96GM1 343 aa8.36□□□□□ -1.07
CCDC50-203ENST00000460064 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 DCDC2CA8MYV0 355 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 GFRA2O00451 464 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 DLL1O00548 723 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 AOC2O75106 756 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 KIF4BQ2VIQ3 1234 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 LRFN4Q6PJG9 635 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 C12orf40Q86WS4 652 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 POLR3KQ9Y2Y1 108 aaPredicted RBP8.35□□□□□ -1.07
CCDC50-203ENST00000460064 CSADQ9Y600 493 aa8.35□□□□□ -1.07
CCDC50-203ENST00000460064 PIK3R2O00459 728 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 SELPP16109 830 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 ANKS3Q6ZW76 656 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 WDR18Q9BV38 432 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 EHMT1Q9H9B1 1298 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 MKL2Q9ULH7 1088 aa8.34□□□□□ -1.07
CCDC50-203ENST00000460064 R3HCC1Q9Y3T6 440 aaKnown RBP8.34□□□□□ -1.07
CCDC50-203ENST00000460064 GNB5O14775 395 aa8.33□□□□□ -1.08
CCDC50-203ENST00000460064 IMPDH2P12268 514 aa8.33□□□□□ -1.08
CCDC50-203ENST00000460064 CCDC144BQ3MJ40 725 aa8.33□□□□□ -1.08
CCDC50-203ENST00000460064 SHDQ96IW2 340 aa8.33□□□□□ -1.08
CCDC50-203ENST00000460064 RUSC1Q9BVN2 902 aa8.33□□□□□ -1.08
CCDC50-203ENST00000460064 PRAMEF27A3QJZ7 478 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 ATE1O95260 518 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 GIPRP48546 466 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 ZC3H12AQ5D1E8 599 aaKnown RBP8.32□□□□□ -1.08
CCDC50-203ENST00000460064 AKAP4Q5JQC9 854 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 IGF2-ASQ6U949 168 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 ZNRF3Q9ULT6 936 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 CORINQ9Y5Q5 1042 aa8.32□□□□□ -1.08
CCDC50-203ENST00000460064 WISP1O95388 367 aa8.31□□□□□ -1.08
CCDC50-203ENST00000460064 PLCG1P19174 1290 aa8.31□□□□□ -1.08
CCDC50-203ENST00000460064 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
CCDC50-203ENST00000460064 ACAD11Q709F0 780 aa8.31□□□□□ -1.08
CCDC50-203ENST00000460064 CYFIP1Q7L576 1253 aa8.31□□□□□ -1.08
CCDC50-203ENST00000460064 ZSWIM4Q9H7M6 989 aa8.31□□□□□ -1.08
CCDC50-203ENST00000460064 PRKAG3Q9UGI9 489 aa8.31□□□□□ -1.08
CCDC50-203ENST00000460064 MEGF11A6BM72 1044 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 SMAD7O15105 426 aaKnown RBP8.3□□□□□ -1.08
CCDC50-203ENST00000460064 HTR3BO95264 441 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 ID3Q02535 119 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 PDE4BQ07343 736 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 MLECQ14165 292 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 KIAA1211Q6ZU35 1233 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 OR6P1Q8NGX9 317 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 TMPRSS13Q9BYE2 586 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 TRIM55Q9BYV6 548 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 RNF208Q9H0X6 261 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 PPP1R9AQ9ULJ8 1098 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 HIF3AQ9Y2N7 669 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 TACC3Q9Y6A5 838 aa8.3□□□□□ -1.08
CCDC50-203ENST00000460064 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 PRR36Q9H6K5 1346 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 ELNP15502 786 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 ETF1P62495 437 aaKnown RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 TNNI3KQ59H18 835 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 NBPF6Q5VWK0 638 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 BEND7Q8N7W2 519 aaPredicted RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 C12orf50Q8NA57 414 aaPredicted RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 RBBP8NLQ8NC74 664 aaPredicted RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 HNRNPLLQ8WVV9 542 aaKnown RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 NBPF4Q96M43 638 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 OSBPL2Q9H1P3 480 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 NOP53Q9NZM5 478 aaKnown RBP8.29□□□□□ -1.08
CCDC50-203ENST00000460064 REV1Q9UBZ9 1251 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 PCDHGC5Q9Y5F6 944 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
CCDC50-203ENST00000460064 TMPRSS2O15393 492 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 KLF4O43474 513 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 PGRP06401 933 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 GRK4P32298 578 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 ERVK-24P63145 666 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 GRIK4Q16099 956 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 PPP2R5EQ16537 467 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 PODNQ7Z5L7 613 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 LSRQ86X29 649 aaPredicted RBP8.28□□□□□ -1.08
CCDC50-203ENST00000460064 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms