RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 HSPA6P17066 643 aa13.09□□□□□ -0.31
CCDC12-204ENST00000460035 USP5P45974 858 aa13.09□□□□□ -0.31
CCDC12-204ENST00000460035 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
CCDC12-204ENST00000460035 MAPKAPK5Q8IW41 473 aa13.09□□□□□ -0.31
CCDC12-204ENST00000460035 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
CCDC12-204ENST00000460035 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
CCDC12-204ENST00000460035 FAM198AQ9UFP1 575 aa13.09□□□□□ -0.31
CCDC12-204ENST00000460035 ABT1Q9ULW3 272 aaKnown RBP13.09□□□□□ -0.31
CCDC12-204ENST00000460035 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 MBD4O95243 580 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 HTRA3P83110 453 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 TTC22Q5TAA0 569 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 TEPSINQ96N21 525 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
CCDC12-204ENST00000460035 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.32
CCDC12-204ENST00000460035 ARMT1Q9H993 441 aa13.08□□□□□ -0.32
CCDC12-204ENST00000460035 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
CCDC12-204ENST00000460035 PPP1R12BO60237 982 aaPredicted RBP13.07□□□□□ -0.32
CCDC12-204ENST00000460035 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
CCDC12-204ENST00000460035 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
CCDC12-204ENST00000460035 APPBP2Q92624 585 aa13.07□□□□□ -0.32
CCDC12-204ENST00000460035 PUS7LQ9H0K6 701 aaKnown RBP13.07□□□□□ -0.32
CCDC12-204ENST00000460035 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
CCDC12-204ENST00000460035 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
CCDC12-204ENST00000460035 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
CCDC12-204ENST00000460035 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 PTPRFP10586 1907 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 UBE2Q2LH0YL09 131 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 FKBP1BP68106 108 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 MOB2Q70IA6 237 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 MIGA2Q7L4E1 593 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 ARMC9Q7Z3E5 817 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 OSBP2Q969R2 916 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 HOOK2Q96ED9 719 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 SAP30BPQ9UHR5 308 aaKnown RBP13.06□□□□□ -0.32
CCDC12-204ENST00000460035 ANGEL1Q9UNK9 670 aaKnown RBP13.06□□□□□ -0.32
CCDC12-204ENST00000460035 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
CCDC12-204ENST00000460035 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-204ENST00000460035 PRKAB2O43741 272 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
CCDC12-204ENST00000460035 SDSP20132 328 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 HUNKP57058 714 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-204ENST00000460035 SH3BP5LQ7L8J4 393 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 SEC62Q99442 399 aaKnown RBP13.05□□□□□ -0.32
CCDC12-204ENST00000460035 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-204ENST00000460035 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 SLC4A4Q9Y6R1 1079 aa13.05□□□□□ -0.32
CCDC12-204ENST00000460035 THSD7BQ9C0I4 1608 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 M0R2C6 588 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
CCDC12-204ENST00000460035 APPP05067 770 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 IREB2P48200 963 aaKnown RBP13.04□□□□□ -0.32
CCDC12-204ENST00000460035 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 SDR42E1Q8WUS8 393 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 DDRGK1Q96HY6 314 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
CCDC12-204ENST00000460035 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
CCDC12-204ENST00000460035 PALD1Q9ULE6 856 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 TLL2Q9Y6L7 1015 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 FLT1P17948 1338 aa13.04□□□□□ -0.32
CCDC12-204ENST00000460035 HIP1O00291 1037 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 GPAA1O43292 621 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
CCDC12-204ENST00000460035 GRM1Q13255 1194 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
CCDC12-204ENST00000460035 MAP3K11Q16584 847 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 MCMDC2Q4G0Z9 681 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 SAPCD2Q86UD0 394 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
CCDC12-204ENST00000460035 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
CCDC12-204ENST00000460035 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 ZNF157P51786 506 aaPredicted RBP13.02□□□□□ -0.33
CCDC12-204ENST00000460035 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
CCDC12-204ENST00000460035 CCDC129Q6ZRS4 1044 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.33
CCDC12-204ENST00000460035 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 TRIM34Q9BYJ4 488 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 ZNF341Q9BYN7 854 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.33
CCDC12-204ENST00000460035 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 PI4KBQ9UBF8 816 aa13.02□□□□□ -0.33
CCDC12-204ENST00000460035 A0A0D9SFI3 127 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 UNCXA6NJT0 531 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 RASSF10A6NK89 507 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 PATL2C9JE40 543 aaKnown RBP13.01□□□□□ -0.33
CCDC12-204ENST00000460035 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 GNAT2P19087 354 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 MAP3K10Q02779 954 aa13.01□□□□□ -0.33
CCDC12-204ENST00000460035 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms