RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 NECAB3Q96P71 396 aaPredicted RBP17.29■□□□□ 0.36
PCOLCE-202ENST00000460002 SENP6Q9GZR1 1112 aaPredicted RBP17.29■□□□□ 0.36
PCOLCE-202ENST00000460002 PRKAG2Q9UGJ0 569 aa17.29■□□□□ 0.36
PCOLCE-202ENST00000460002 DNAH12Q6ZR08 3092 aa17.29■□□□□ 0.36
PCOLCE-202ENST00000460002 NCOR1O75376 2440 aa17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 PTPRAP18433 802 aa17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 CYP2B6P20813 491 aa17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 CCND3P30281 292 aaPredicted RBP17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 MBIPQ9NS73 344 aa17.28■□□□□ 0.36
PCOLCE-202ENST00000460002 PLXNB2O15031 1838 aa17.27■□□□□ 0.36
PCOLCE-202ENST00000460002 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
PCOLCE-202ENST00000460002 TCP10Q12799 353 aa17.27■□□□□ 0.36
PCOLCE-202ENST00000460002 TREML2Q5T2D2 321 aa17.27■□□□□ 0.36
PCOLCE-202ENST00000460002 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
PCOLCE-202ENST00000460002 AGTPBP1Q9UPW5 1226 aa17.27■□□□□ 0.36
PCOLCE-202ENST00000460002 PHF20L1A8MW92 1017 aa17.26■□□□□ 0.35
PCOLCE-202ENST00000460002 RTP1P59025 263 aa17.26■□□□□ 0.35
PCOLCE-202ENST00000460002 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
PCOLCE-202ENST00000460002 BADQ92934 168 aa17.26■□□□□ 0.35
PCOLCE-202ENST00000460002 MRIQ9BWK5 157 aa17.26■□□□□ 0.35
PCOLCE-202ENST00000460002 IQSEC3Q9UPP2 1182 aaPredicted RBP17.26■□□□□ 0.35
PCOLCE-202ENST00000460002 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
PCOLCE-202ENST00000460002 GCKRQ14397 625 aa17.25■□□□□ 0.35
PCOLCE-202ENST00000460002 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
PCOLCE-202ENST00000460002 PICK1Q9NRD5 415 aa17.25■□□□□ 0.35
PCOLCE-202ENST00000460002 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
PCOLCE-202ENST00000460002 NFIAQ12857 509 aa17.24■□□□□ 0.35
PCOLCE-202ENST00000460002 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
PCOLCE-202ENST00000460002 ATRNL1Q5VV63 1379 aa17.24■□□□□ 0.35
PCOLCE-202ENST00000460002 PTPRFP10586 1907 aa17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 XRCC5P13010 732 aaKnown RBP17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 ZNF594Q96JF6 807 aaPredicted RBP17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 ZNF576Q9H609 170 aa17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 ATP11BQ9Y2G3 1177 aa17.23■□□□□ 0.35
PCOLCE-202ENST00000460002 ZKSCAN1P17029 563 aaPredicted RBP17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 DNAJB2P25686 324 aa17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 GCLCP48506 637 aaPredicted RBP17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 UBE4AQ14139 1066 aa17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 AKNAD1Q5T1N1 836 aa17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 HHIPL2Q6UWX4 724 aa17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 CCDC84Q86UT8 332 aaPredicted RBP17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 PRDM5Q9NQX1 630 aaPredicted RBP17.22■□□□□ 0.35
PCOLCE-202ENST00000460002 FOXO4P98177 505 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 CCL14Q16627 93 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 ZFPM1Q8IX07 1006 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 RNPC3Q96LT9 517 aaKnown RBP17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
PCOLCE-202ENST00000460002 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 EPHB4P54760 987 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 CDC42EP5Q6NZY7 148 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 CNNM1Q9NRU3 951 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
PCOLCE-202ENST00000460002 SLURP2P0DP57 97 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 BMP1P13497 986 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 CCDC85BQ15834 202 aaPredicted RBP17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 SH3RF1Q7Z6J0 888 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 SOCS4Q8WXH5 440 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 GAS2L1Q99501 681 aaPredicted RBP17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 DAGLAQ9Y4D2 1042 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 MUC6Q6W4X9 2439 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 MAST3O60307 1309 aa17.19■□□□□ 0.34
PCOLCE-202ENST00000460002 TRIM43BA6NCK2 446 aa17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 PEX10O60683 326 aa17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 USP6NLQ92738 828 aa17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 TRIM43Q96BQ3 446 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 PDLIM7Q9NR12 457 aa17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 FRMPD3Q5JV73 1810 aa17.18■□□□□ 0.34
PCOLCE-202ENST00000460002 DNM1LO00429 736 aa17.17■□□□□ 0.34
PCOLCE-202ENST00000460002 ADGRE1Q14246 886 aa17.17■□□□□ 0.34
PCOLCE-202ENST00000460002 TIFAQ96CG3 184 aa17.17■□□□□ 0.34
PCOLCE-202ENST00000460002 PRDM12Q9H4Q4 367 aa17.17■□□□□ 0.34
PCOLCE-202ENST00000460002 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-202ENST00000460002 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 ITGB8P26012 769 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 MRE11P49959 708 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 TRIM60Q495X7 471 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 SLC39A5Q6ZMH5 540 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms