RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 TEPSINQ96N21 525 aa26.38■■□□□ 1.81
SSNA1-202ENST00000459860 RFX7Q2KHR2 1363 aa26.37■■□□□ 1.81
SSNA1-202ENST00000459860 ENTPD3O75355 529 aa26.37■■□□□ 1.81
SSNA1-202ENST00000459860 IREB2P48200 963 aaKnown RBP26.37■■□□□ 1.81
SSNA1-202ENST00000459860 RGS3P49796 1198 aa26.37■■□□□ 1.81
SSNA1-202ENST00000459860 PICALMQ13492 652 aa26.37■■□□□ 1.81
SSNA1-202ENST00000459860 CERS3Q8IU89 383 aa26.37■■□□□ 1.81
SSNA1-202ENST00000459860 TEX11Q8IYF3 940 aa26.37■■□□□ 1.81
SSNA1-202ENST00000459860 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.37■■□□□ 1.81
SSNA1-202ENST00000459860 AATFQ9NY61 560 aaKnown RBP eCLIP26.37■■□□□ 1.81
SSNA1-202ENST00000459860 IGHDP01880 384 aa26.36■■□□□ 1.81
SSNA1-202ENST00000459860 MX1P20591 662 aa26.36■■□□□ 1.81
SSNA1-202ENST00000459860 FAM198AQ9UFP1 575 aa26.36■■□□□ 1.81
SSNA1-202ENST00000459860 FOCADQ5VW36 1801 aa26.36■■□□□ 1.81
SSNA1-202ENST00000459860 CDK5RAP2Q96SN8 1893 aa26.36■■□□□ 1.81
SSNA1-202ENST00000459860 RHBDL3P58872 404 aa26.35■■□□□ 1.81
SSNA1-202ENST00000459860 SLC9C2Q5TAH2 1124 aa26.35■■□□□ 1.81
SSNA1-202ENST00000459860 DCAF15Q66K64 600 aa26.35■■□□□ 1.81
SSNA1-202ENST00000459860 B4GALNT3Q6L9W6 998 aa26.35■■□□□ 1.81
SSNA1-202ENST00000459860 ZSCAN29Q8IWY8 852 aaPredicted RBP26.35■■□□□ 1.81
SSNA1-202ENST00000459860 EDC3Q96F86 508 aaKnown RBP26.35■■□□□ 1.81
SSNA1-202ENST00000459860 OTOFQ9HC10 1997 aa26.35■■□□□ 1.81
SSNA1-202ENST00000459860 WDHD1O75717 1129 aaPredicted RBP26.34■■□□□ 1.81
SSNA1-202ENST00000459860 PPP4CP60510 307 aa26.34■■□□□ 1.81
SSNA1-202ENST00000459860 MAP3K11Q16584 847 aa26.34■■□□□ 1.81
SSNA1-202ENST00000459860 TSHZ3Q63HK5 1081 aa26.34■■□□□ 1.81
SSNA1-202ENST00000459860 ADGRA1Q86SQ6 560 aa26.34■■□□□ 1.81
SSNA1-202ENST00000459860 CDAN1Q8IWY9 1227 aa26.34■■□□□ 1.81
SSNA1-202ENST00000459860 UNCXA6NJT0 531 aa26.33■■□□□ 1.81
SSNA1-202ENST00000459860 GLRX3O76003 335 aaKnown RBP26.33■■□□□ 1.81
SSNA1-202ENST00000459860 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
SSNA1-202ENST00000459860 PDE6AP16499 860 aa26.33■■□□□ 1.81
SSNA1-202ENST00000459860 ZSCAN25Q6NSZ9 544 aa26.33■■□□□ 1.81
SSNA1-202ENST00000459860 SH3RF3Q8TEJ3 882 aaPredicted RBP26.33■■□□□ 1.81
SSNA1-202ENST00000459860 FZD1Q9UP38 647 aa26.33■■□□□ 1.81
SSNA1-202ENST00000459860 NPM3O75607 178 aaKnown RBP26.32■■□□□ 1.8
SSNA1-202ENST00000459860 MIGA1Q8NAN2 632 aa26.32■■□□□ 1.8
SSNA1-202ENST00000459860 OTUD7AQ8TE49 926 aaPredicted RBP26.32■■□□□ 1.8
SSNA1-202ENST00000459860 LNPKQ9C0E8 428 aa26.32■■□□□ 1.8
SSNA1-202ENST00000459860 CTU1Q7Z7A3 348 aaKnown RBP26.31■■□□□ 1.8
SSNA1-202ENST00000459860 ANKRD13AQ8IZ07 590 aa26.31■■□□□ 1.8
SSNA1-202ENST00000459860 DDX4Q9NQI0 724 aaKnown RBP26.31■■□□□ 1.8
SSNA1-202ENST00000459860 COL2A1P02458 1487 aaPredicted RBP26.3■■□□□ 1.8
SSNA1-202ENST00000459860 USP2O75604 605 aaPredicted RBP26.3■■□□□ 1.8
SSNA1-202ENST00000459860 TM4SF4P48230 202 aa26.3■■□□□ 1.8
SSNA1-202ENST00000459860 LDLRAD1Q5T700 205 aa26.3■■□□□ 1.8
SSNA1-202ENST00000459860 CHD1LQ86WJ1 897 aa26.3■■□□□ 1.8
SSNA1-202ENST00000459860 ZNF532Q9HCE3 1301 aa26.3■■□□□ 1.8
SSNA1-202ENST00000459860 DYNLL1P63167 89 aaKnown RBP26.29■■□□□ 1.8
SSNA1-202ENST00000459860 LRRFIP1Q32MZ4 808 aaKnown RBP26.29■■□□□ 1.8
SSNA1-202ENST00000459860 ZNF341Q9BYN7 854 aa26.29■■□□□ 1.8
SSNA1-202ENST00000459860 OSBPL5Q9H0X9 879 aaPredicted RBP26.29■■□□□ 1.8
SSNA1-202ENST00000459860 SALL3Q9BXA9 1300 aa26.29■■□□□ 1.8
SSNA1-202ENST00000459860 MAGEB6P1A0A0J9YX57 407 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 ADD2P35612 726 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 NUCB1Q02818 461 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 ZFPM1Q8IX07 1006 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 KBTBD3Q8NAB2 608 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 PI4K2BQ8TCG2 481 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 SLC10A4Q96EP9 437 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.28■■□□□ 1.8
SSNA1-202ENST00000459860 CSADQ9Y600 493 aa26.28■■□□□ 1.8
SSNA1-202ENST00000459860 TBC1D8O95759 1140 aa26.27■■□□□ 1.8
SSNA1-202ENST00000459860 NEFLP07196 543 aa26.27■■□□□ 1.8
SSNA1-202ENST00000459860 TGFBRAP1Q8WUH2 860 aa26.27■■□□□ 1.8
SSNA1-202ENST00000459860 ATRNL1Q5VV63 1379 aa26.27■■□□□ 1.8
SSNA1-202ENST00000459860 MYH1P12882 1939 aa26.27■■□□□ 1.8
SSNA1-202ENST00000459860 NAV1Q8NEY1 1877 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 FLT1P17948 1338 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 USP5P45974 858 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 PDE1AP54750 535 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 MAP3K9P80192 1104 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 MIGA2Q7L4E1 593 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 MAPKAPK5Q8IW41 473 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 WRNIP1Q96S55 665 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 STAP2Q9UGK3 403 aa26.26■■□□□ 1.79
SSNA1-202ENST00000459860 TCRBV5S4A2TA0A5A2 114 aa26.25■■□□□ 1.79
SSNA1-202ENST00000459860 DDTLA6NHG4 134 aaPredicted RBP26.25■■□□□ 1.79
SSNA1-202ENST00000459860 UBE3CQ15386 1083 aa26.25■■□□□ 1.79
SSNA1-202ENST00000459860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.25■■□□□ 1.792e-6■□□□□ 8.3
SSNA1-202ENST00000459860 ZNF296Q8WUU4 475 aaPredicted RBP26.25■■□□□ 1.79
SSNA1-202ENST00000459860 SLC34A2O95436 690 aa26.24■■□□□ 1.79
SSNA1-202ENST00000459860 SOX10P56693 466 aa26.24■■□□□ 1.79
SSNA1-202ENST00000459860 MKRN3Q13064 507 aaKnown RBP26.24■■□□□ 1.79
SSNA1-202ENST00000459860 SH3BP5LQ7L8J4 393 aa26.24■■□□□ 1.79
SSNA1-202ENST00000459860 CLMNQ96JQ2 1002 aa26.24■■□□□ 1.79
SSNA1-202ENST00000459860 CRNKL1Q9BZJ0 848 aaKnown RBP26.24■■□□□ 1.79
SSNA1-202ENST00000459860 DHX36Q9H2U1 1008 aaKnown RBP26.24■■□□□ 1.79
SSNA1-202ENST00000459860 ZFYP08048 801 aaPredicted RBP26.23■■□□□ 1.79
SSNA1-202ENST00000459860 NOM1Q5C9Z4 860 aaKnown RBP26.23■■□□□ 1.79
SSNA1-202ENST00000459860 RIOK1Q9BRS2 568 aaKnown RBP26.23■■□□□ 1.79
SSNA1-202ENST00000459860 FSD1Q9BTV5 496 aa26.23■■□□□ 1.79
SSNA1-202ENST00000459860 CFHR5Q9BXR6 569 aa26.23■■□□□ 1.79
SSNA1-202ENST00000459860 VGLL4Q14135 290 aa26.22■■□□□ 1.79
SSNA1-202ENST00000459860 SPRYD7Q5W111 196 aa26.22■■□□□ 1.79
SSNA1-202ENST00000459860 R3HDMLQ9H3Y0 253 aa26.22■■□□□ 1.79
SSNA1-202ENST00000459860 ELP3Q9H9T3 547 aa26.22■■□□□ 1.79
SSNA1-202ENST00000459860 GPR25O00155 361 aa26.21■■□□□ 1.79
SSNA1-202ENST00000459860 HLA-DOAP06340 250 aa26.21■■□□□ 1.79
SSNA1-202ENST00000459860 ZBTB48P10074 688 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms