RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 CPVLQ9H3G5 476 aa10.49□□□□□ -0.73
MCF2L2-204ENST00000459750 CFAP45Q9UL16 551 aa10.49□□□□□ -0.73
MCF2L2-204ENST00000459750 NUP188Q5SRE5 1749 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 HMGN5P82970 282 aaKnown RBP10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 ARID5BQ14865 1188 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 KRT40Q6A162 431 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 SMARCC1Q92922 1105 aaPredicted RBP10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 LAMB4A4D0S4 1761 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 DOT1LQ8TEK3 1739 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 AKNAD1Q5T1N1 836 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 SLC44A5Q8NCS7 719 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 DYNLL2Q96FJ2 89 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 LY9Q9HBG7 655 aa10.48□□□□□ -0.73
MCF2L2-204ENST00000459750 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 NUP98P52948 1817 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 SH2B2O14492 632 aaPredicted RBP10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 PTGS1P23219 599 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 GRIN1Q05586 938 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 DMTNQ08495 405 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 WTAPQ15007 396 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 FILIP1Q7Z7B0 1213 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 MECOMQ03112 1051 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 PPARAQ07869 468 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 THRAP3Q9Y2W1 955 aaKnown RBP10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 ERICH2A1L162 156 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 RAD21O60216 631 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 COBLO75128 1261 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 TRAPPC3LQ5T215 181 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 UIMC1Q96RL1 719 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 KIF3AQ9Y496 699 aa10.47□□□□□ -0.73
MCF2L2-204ENST00000459750 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 AFF2P51816 1311 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 BECN2A8MW95 431 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 WDHD1O75717 1129 aaPredicted RBP10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 GRAMD1CQ8IYS0 662 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 STAMQ92783 540 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 PDLIM2Q96JY6 352 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 ZSCAN16Q9H4T2 348 aaPredicted RBP10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
MCF2L2-204ENST00000459750 TNKSO95271 1327 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 SPTLC2O15270 562 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 FOXN1O15353 648 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 DHX16O60231 1041 aaKnown RBP10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 PLEKHA8P1O95397 391 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 TRIM29Q14134 588 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 DZIP1Q86YF9 867 aaKnown RBP10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 FUCA2Q9BTY2 467 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 MXD3Q9BW11 206 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 CLSTN2Q9H4D0 955 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 FAM217BQ9NTX9 383 aaPredicted RBP10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
MCF2L2-204ENST00000459750 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 CASP1P29466 404 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 CCDC186Q7Z3E2 898 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 ZNF396Q96N95 335 aaPredicted RBP10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 AGXT2Q9BYV1 514 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 PYCARDQ9ULZ3 195 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 ZKSCAN5Q9Y2L8 839 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 V9GY48 417 aaPredicted RBP10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 RTN1Q16799 776 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 MAPKAPK5Q8IW41 473 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 CNBD1Q8NA66 436 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 LLPHQ9BRT6 129 aaKnown RBP10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 ALDH8A1Q9H2A2 487 aaPredicted RBP10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 PRDM10Q9NQV6 1147 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 CCDC39Q9UFE4 941 aa10.45□□□□□ -0.74
MCF2L2-204ENST00000459750 SSRP1Q08945 709 aaKnown RBP10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 ZNF827Q17R98 1081 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 CPLX2Q6PUV4 134 aaKnown RBP10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 CREBRFQ8IUR6 639 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 CABP5Q9NP86 173 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 NARFQ9UHQ1 456 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 LRP6O75581 1613 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 SALL1Q9NSC2 1324 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 GOLGA6L19H0YKK7 550 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 ADAMTS3O15072 1205 aa10.44□□□□□ -0.74
MCF2L2-204ENST00000459750 GOLGA8HP0CJ92 632 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms