RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 SPATS2Q86XZ4 545 aaKnown RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 BICD2Q8TD16 824 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 ERCC4Q92889 916 aaPredicted RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 TATDN2Q93075 761 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 SCAND2PQ9GZW5 306 aaPredicted RBP13□□□□□ -0.33
DDX39B-214ENST00000458640 ETAA1Q9NY74 926 aa13□□□□□ -0.33
DDX39B-214ENST00000458640 MYH3P11055 1940 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 TXLNAP40222 546 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 RWDD2BP57060 319 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 FOXO4P98177 505 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 GRIK3Q13003 919 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 ITPK1Q13572 414 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 PREPLQ4J6C6 727 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-214ENST00000458640 AACSQ86V21 672 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 GOLGA1Q92805 767 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 CCDC34Q96HJ3 373 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 SIL1Q9H173 461 aa12.99□□□□□ -0.33
DDX39B-214ENST00000458640 LY75O60449 1722 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 A0A1B0GUA9 196 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ANKRD18BA2A2Z9 1011 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-214ENST00000458640 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
DDX39B-214ENST00000458640 TUBB2AQ13885 445 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-214ENST00000458640 TUBB2BQ9BVA1 445 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ECHDC1Q9NTX5 307 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 SMC3Q9UQE7 1217 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
DDX39B-214ENST00000458640 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 A6NNZ2 444 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 SCP2P22307 547 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 TUBB8Q3ZCM7 444 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ZC3H12AQ5D1E8 599 aaKnown RBP12.98□□□□□ -0.33
DDX39B-214ENST00000458640 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 PSMD1Q99460 953 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ESYT1Q9BSJ8 1104 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 PARD6BQ9BYG5 372 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
DDX39B-214ENST00000458640 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 NEBLO76041 1014 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 SASH1O94885 1247 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 SCRN1Q12765 414 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 HLFQ16534 295 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 WLSQ5T9L3 541 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 PI4K2BQ8TCG2 481 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 RILPL2Q969X0 211 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 CARD6Q9BX69 1037 aa12.97□□□□□ -0.33
DDX39B-214ENST00000458640 SPATS2LQ9NUQ6 558 aaKnown RBP12.97□□□□□ -0.33
DDX39B-214ENST00000458640 SCN7AQ01118 1682 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 EBAG9O00559 213 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 RGL2O15211 777 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 FOXD4L6Q3SYB3 417 aaPredicted RBP12.96□□□□□ -0.33
DDX39B-214ENST00000458640 PARP10Q53GL7 1025 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 KCNV1Q6PIU1 500 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 FOXD4L3Q6VB84 417 aaPredicted RBP12.96□□□□□ -0.33
DDX39B-214ENST00000458640 LRRN4CLQ8ND94 238 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
DDX39B-214ENST00000458640 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
DDX39B-214ENST00000458640 RAB21Q9UL25 225 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
DDX39B-214ENST00000458640 GOLGA6L4A6NEF3 574 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.34
DDX39B-214ENST00000458640 STX1AQ16623 288 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 KAT2BQ92831 832 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.34
DDX39B-214ENST00000458640 VIPAS39Q9H9C1 493 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.34
DDX39B-214ENST00000458640 LAMB2P55268 1798 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 CIAO1O76071 339 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 SFPQP23246 707 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 IL15P40933 162 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 MAGEC3Q8TD91 643 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 TRMT112Q9UI30 125 aaKnown RBP12.95□□□□□ -0.34
DDX39B-214ENST00000458640 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 BECN2A8MW95 431 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 INPP5BP32019 993 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 INHBEP58166 350 aa12.95□□□□□ -0.34
DDX39B-214ENST00000458640 PDCD2Q16342 344 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms