RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DHX36Q9H2U1 1008 aaKnown RBP19.57■□□□□ 0.72
CD28-203ENST00000458610 FZD1Q9UP38 647 aa19.57■□□□□ 0.72
CD28-203ENST00000458610 CTCFP49711 727 aaPredicted RBP19.56■□□□□ 0.72
CD28-203ENST00000458610 SREBF2Q12772 1141 aa19.56■□□□□ 0.72
CD28-203ENST00000458610 LRRFIP1Q32MZ4 808 aaKnown RBP19.56■□□□□ 0.72
CD28-203ENST00000458610 MIGA2Q7L4E1 593 aa19.56■□□□□ 0.72
CD28-203ENST00000458610 ZFPM1Q8IX07 1006 aa19.56■□□□□ 0.72
CD28-203ENST00000458610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.56■□□□□ 0.72
CD28-203ENST00000458610 SH3RF3Q8TEJ3 882 aaPredicted RBP19.56■□□□□ 0.72
CD28-203ENST00000458610 GLRX3O76003 335 aaKnown RBP19.55■□□□□ 0.72
CD28-203ENST00000458610 PDE6AP16499 860 aa19.55■□□□□ 0.72
CD28-203ENST00000458610 ADGRA1Q86SQ6 560 aa19.55■□□□□ 0.72
CD28-203ENST00000458610 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
CD28-203ENST00000458610 OSBPL5Q9H0X9 879 aaPredicted RBP19.55■□□□□ 0.72
CD28-203ENST00000458610 DDX4Q9NQI0 724 aaKnown RBP19.55■□□□□ 0.72
CD28-203ENST00000458610 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
CD28-203ENST00000458610 MAGEB6P1A0A0J9YX57 407 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 MANSC4A6NHS7 340 aaPredicted RBP19.54■□□□□ 0.72
CD28-203ENST00000458610 TBC1D12O60347 775 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 MX1P20591 662 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.54■□□□□ 0.72
CD28-203ENST00000458610 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 MIGA1Q8NAN2 632 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 WNK4Q96J92 1243 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 CLMNQ96JQ2 1002 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 RFX7Q2KHR2 1363 aa19.54■□□□□ 0.72
CD28-203ENST00000458610 USP5P45974 858 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 UBE3CQ15386 1083 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 TGFBRAP1Q8WUH2 860 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 ZIC5Q96T25 663 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 ELP3Q9H9T3 547 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 PI4KBQ9UBF8 816 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 ZNF112Q9UJU3 913 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 ATRNL1Q5VV63 1379 aa19.53■□□□□ 0.72
CD28-203ENST00000458610 ZNF532Q9HCE3 1301 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 DDTLA6NHG4 134 aaPredicted RBP19.52■□□□□ 0.72
CD28-203ENST00000458610 FOXN1O15353 648 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 TM4SF4P48230 202 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 DYNLL1P63167 89 aaKnown RBP19.52■□□□□ 0.72
CD28-203ENST00000458610 MAP3K10Q02779 954 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 VGLL4Q14135 290 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 ERO1BQ86YB8 467 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 FOXP4Q8IVH2 680 aaPredicted RBP19.52■□□□□ 0.72
CD28-203ENST00000458610 EDC3Q96F86 508 aaKnown RBP19.52■□□□□ 0.72
CD28-203ENST00000458610 CRNKL1Q9BZJ0 848 aaKnown RBP19.52■□□□□ 0.72
CD28-203ENST00000458610 SAGE1Q9NXZ1 904 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 CEP350Q5VT06 3117 aa19.52■□□□□ 0.72
CD28-203ENST00000458610 COL2A1P02458 1487 aaPredicted RBP19.52■□□□□ 0.72
CD28-203ENST00000458610 HLA-DOAP06340 250 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 ADD2P35612 726 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 MKRN3Q13064 507 aaKnown RBP19.51■□□□□ 0.71
CD28-203ENST00000458610 OTUD7BQ6GQQ9 843 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 SH3BP5LQ7L8J4 393 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 MAPKAPK5Q8IW41 473 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 KBTBD3Q8NAB2 608 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 OPTNQ96CV9 577 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
CD28-203ENST00000458610 THSD7BQ9C0I4 1608 aa19.51■□□□□ 0.71
CD28-203ENST00000458610 MAST2Q6P0Q8 1798 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 SPDYE5A6NIY4 337 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 ALDH1A1P00352 501 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 IGHDP01880 384 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 ZFYP08048 801 aaPredicted RBP19.5■□□□□ 0.71
CD28-203ENST00000458610 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
CD28-203ENST00000458610 ZKSCAN4Q969J2 545 aaPredicted RBP19.5■□□□□ 0.71
CD28-203ENST00000458610 RIOK1Q9BRS2 568 aaKnown RBP19.5■□□□□ 0.71
CD28-203ENST00000458610 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
CD28-203ENST00000458610 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 FLT1P17948 1338 aa19.5■□□□□ 0.71
CD28-203ENST00000458610 TCRBV5S4A2TA0A5A2 114 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 CTNND1O60716 968 aaKnown RBP19.49■□□□□ 0.71
CD28-203ENST00000458610 GTF2A2P52657 109 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 PPATQ06203 517 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 NOL9Q5SY16 702 aaKnown RBP19.49■□□□□ 0.71
CD28-203ENST00000458610 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 TTC6Q86TZ1 520 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 CHD1LQ86WJ1 897 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 PICK1Q9NRD5 415 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 RNF186Q9NXI6 227 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
CD28-203ENST00000458610 INPP5BP32019 993 aa19.48■□□□□ 0.71
CD28-203ENST00000458610 NUCB1Q02818 461 aa19.48■□□□□ 0.71
CD28-203ENST00000458610 CRACR2BQ8N4Y2 399 aaPredicted RBP19.48■□□□□ 0.71
CD28-203ENST00000458610 OTUD5Q96G74 571 aa19.48■□□□□ 0.71
CD28-203ENST00000458610 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
CD28-203ENST00000458610 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
CD28-203ENST00000458610 SNCAIPQ9Y6H5 919 aa19.48■□□□□ 0.71
CD28-203ENST00000458610 AK9Q5TCS8 1911 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 TRPA1O75762 1119 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 HSPA8P11142 646 aaKnown RBP19.47■□□□□ 0.71
CD28-203ENST00000458610 LBX1P52954 281 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 PDE1AP54750 535 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 PPIL2Q13356 520 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 TSHZ3Q63HK5 1081 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 SCYL3Q8IZE3 742 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 PI4K2BQ8TCG2 481 aa19.47■□□□□ 0.71
CD28-203ENST00000458610 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
CD28-203ENST00000458610 RNF113AO15541 343 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms