RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 DTWD1Q8N5C7 304 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 KIAA1524Q8TCG1 905 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 RHPN1Q8TCX5 695 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 CCDC97Q96F63 343 aaPredicted RBP6.55□□□□□ -1.36
HMGB4-202ENST00000458277 UBA5Q9GZZ9 404 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 VEZTQ9HBM0 779 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 TOMM22Q9NS69 142 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 CHCHD3Q9NX63 227 aaKnown RBP6.55□□□□□ -1.36
HMGB4-202ENST00000458277 DNAJB12Q9NXW2 375 aaKnown RBP6.55□□□□□ -1.36
HMGB4-202ENST00000458277 TRAK1Q9UPV9 953 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 SMC3Q9UQE7 1217 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 LRRFIP2Q9Y608 721 aaKnown RBP6.55□□□□□ -1.36
HMGB4-202ENST00000458277 ARHGEF11O15085 1522 aa6.55□□□□□ -1.36
HMGB4-202ENST00000458277 RIMBP3CA6NJZ7 1639 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 RIMBP3BA6NNM3 1639 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 RIMBP3Q9UFD9 1639 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 SCAF11Q99590 1463 aaKnown RBP6.54□□□□□ -1.36
HMGB4-202ENST00000458277 CCDC171Q6TFL3 1326 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 A0A087WUV0 522 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-202ENST00000458277 SFI1A8K8P3 1242 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 NEMFO60524 1076 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 ZRANB2O95218 330 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB4-202ENST00000458277 CCDC186Q7Z3E2 898 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 FILIP1Q7Z7B0 1213 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 NLRP13Q86W25 1043 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 TEX11Q8IYF3 940 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 RPUSD2Q8IZ73 545 aaKnown RBP6.54□□□□□ -1.36
HMGB4-202ENST00000458277 C7orf43Q8WVR3 580 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 HSH2DQ96JZ2 352 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 PCMTD1Q96MG8 357 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-202ENST00000458277 AKTIPQ9H8T0 292 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-202ENST00000458277 ANKRD36BQ8N2N9 1353 aa6.54□□□□□ -1.36
HMGB4-202ENST00000458277 IGLV1-40P01703 118 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 ABCD1P33897 745 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 ACTN2P35609 894 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 TUBB4BP68371 445 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 FAM50AQ14320 339 aaKnown RBP6.53□□□□□ -1.36
HMGB4-202ENST00000458277 MYBPC2Q14324 1141 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 TEAD4Q15561 434 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 TBCELQ5QJ74 424 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 SH3PXD2AQ5TCZ1 1133 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 HDGFL1Q5TGJ6 251 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 OGFOD2Q6N063 350 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 GBP6Q6ZN66 633 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 ARMCX6Q7L4S7 300 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 SDR16C5Q8N3Y7 309 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 ZBTB9Q96C00 473 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 TRIM6Q9C030 488 aaPredicted RBP6.53□□□□□ -1.36
HMGB4-202ENST00000458277 RWDD1Q9H446 243 aaPredicted RBP6.53□□□□□ -1.36
HMGB4-202ENST00000458277 ATG3Q9NT62 314 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 STK26Q9P289 416 aa6.53□□□□□ -1.36
HMGB4-202ENST00000458277 UGGT2Q9NYU1 1516 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 CDKL5O76039 1030 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 GCFC2P16383 781 aaKnown RBP6.52□□□□□ -1.37
HMGB4-202ENST00000458277 NF2P35240 595 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 PEX19P40855 299 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 MNAT1P51948 309 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 KCNQ4P56696 695 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 CORO7P57737 925 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 MIPOL1Q8TD10 442 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 MIEF2Q96C03 454 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 RMDN2Q96LZ7 410 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 IQCGQ9H095 443 aaKnown RBP6.52□□□□□ -1.37
HMGB4-202ENST00000458277 ACBD3Q9H3P7 528 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 HOMER3Q9NSC5 361 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 GNL3LQ9NVN8 582 aaKnown RBP6.52□□□□□ -1.37
HMGB4-202ENST00000458277 SCHIP1Q9P0W5 487 aaPredicted RBP6.52□□□□□ -1.37
HMGB4-202ENST00000458277 CLIP2Q9UDT6 1046 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 CHIC2Q9UKJ5 165 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 GPC6Q9Y625 555 aaPredicted RBP6.52□□□□□ -1.37
HMGB4-202ENST00000458277 ARHGAP35Q9NRY4 1499 aa6.52□□□□□ -1.37
HMGB4-202ENST00000458277 KIF7Q2M1P5 1343 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 KINO60870 393 aaKnown RBP6.51□□□□□ -1.37
HMGB4-202ENST00000458277 C8AP07357 584 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 PAX7P23759 505 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 TMCO3Q6UWJ1 677 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 SDCCAG8Q86SQ7 713 aaPredicted RBP6.51□□□□□ -1.37
HMGB4-202ENST00000458277 WFDC8Q8IUA0 241 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 CCDC50Q8IVM0 306 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 SRRTQ9BXP5 876 aaKnown RBP6.51□□□□□ -1.37
HMGB4-202ENST00000458277 STK31Q9BXU1 1019 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 BATF3Q9NR55 127 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 ADGRE2Q9UHX3 823 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 MYO6Q9UM54 1294 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 TBC1D2BQ9UPU7 963 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 RAXQ9Y2V3 346 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 IQGAP2Q13576 1575 aa6.51□□□□□ -1.37
HMGB4-202ENST00000458277 PTPRCP08575 1304 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 IL16Q14005 1332 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 EFCAB5A4FU69 1503 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 CAMSAP2Q08AD1 1489 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 ARAP1Q96P48 1450 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 GOLGA6L10A6NI86 522 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 BACH1O14867 736 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 GSC2O15499 205 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 DEAF1O75398 565 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 SLU7O95391 586 aaKnown RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 WNT11O96014 354 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms