RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
LINC00887-204ENST00000456816 MCM9Q9NXL9 1143 aa16.89■□□□□ 0.29
LINC00887-204ENST00000456816 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
LINC00887-204ENST00000456816 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
LINC00887-204ENST00000456816 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
LINC00887-204ENST00000456816 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 ENTPD3O75355 529 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
LINC00887-204ENST00000456816 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
LINC00887-204ENST00000456816 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
LINC00887-204ENST00000456816 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
LINC00887-204ENST00000456816 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
LINC00887-204ENST00000456816 POTEJP0CG39 1038 aa16.87■□□□□ 0.29
LINC00887-204ENST00000456816 RASA3Q14644 834 aa16.87■□□□□ 0.29
LINC00887-204ENST00000456816 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
LINC00887-204ENST00000456816 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
LINC00887-204ENST00000456816 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
LINC00887-204ENST00000456816 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
LINC00887-204ENST00000456816 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 PTH1RQ03431 593 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 MAP1SQ66K74 1059 aaPredicted RBP16.86■□□□□ 0.29
LINC00887-204ENST00000456816 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 FAM83AQ86UY5 434 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 FAM151AQ8WW52 585 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 TMEM39BQ9GZU3 492 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
LINC00887-204ENST00000456816 CTNNA3Q9UI47 895 aa16.86■□□□□ 0.29
LINC00887-204ENST00000456816 MINDY4BA8MYZ0 360 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 ADM5C9JUS6 153 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
LINC00887-204ENST00000456816 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 ZFPM1Q8IX07 1006 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
LINC00887-204ENST00000456816 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
LINC00887-204ENST00000456816 CNTNAP1P78357 1384 aa16.85■□□□□ 0.29
LINC00887-204ENST00000456816 USP17L12C9JPN9 530 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 USP17L21D6R901 530 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 ALX1Q15699 326 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 CDC37L1Q7L3B6 337 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
LINC00887-204ENST00000456816 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 GLIS2Q9BZE0 524 aaPredicted RBP16.84■□□□□ 0.29
LINC00887-204ENST00000456816 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
LINC00887-204ENST00000456816 DHX36Q9H2U1 1008 aaKnown RBP16.84■□□□□ 0.29
LINC00887-204ENST00000456816 PGAP2Q9UHJ9 254 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 ECM29Q5VYK3 1845 aa16.84■□□□□ 0.29
LINC00887-204ENST00000456816 FGAP02671 866 aa16.83■□□□□ 0.28
LINC00887-204ENST00000456816 CYP2D6P10635 497 aa16.83■□□□□ 0.28
LINC00887-204ENST00000456816 IMMTQ16891 758 aaKnown RBP16.83■□□□□ 0.28
LINC00887-204ENST00000456816 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
LINC00887-204ENST00000456816 CTR9Q6PD62 1173 aa16.83■□□□□ 0.28
LINC00887-204ENST00000456816 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
LINC00887-204ENST00000456816 RBM8AQ9Y5S9 174 aaKnown RBP16.83■□□□□ 0.28
LINC00887-204ENST00000456816 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 ZMYM6O95789 1325 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 CYP2D7A0A087X1C5 515 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 DDTLA6NHG4 134 aaPredicted RBP16.82■□□□□ 0.28
LINC00887-204ENST00000456816 KIF3CO14782 793 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 FOXP2O15409 715 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 SLC3A2P08195 630 aaKnown RBP16.82■□□□□ 0.28
LINC00887-204ENST00000456816 MCCP23508 829 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 NF2P35240 595 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 HAND2P61296 217 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 STK11IPQ8N1F8 1099 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
LINC00887-204ENST00000456816 MKRN1Q9UHC7 482 aaKnown RBP16.82■□□□□ 0.28
LINC00887-204ENST00000456816 ZNF213O14771 459 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 PPARAQ07869 468 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 SUPT20HL1Q3ZLR7 823 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 ZNF408Q9H9D4 720 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 PI4KBQ9UBF8 816 aa16.81■□□□□ 0.28
LINC00887-204ENST00000456816 COL2A1P02458 1487 aaPredicted RBP16.8■□□□□ 0.28
LINC00887-204ENST00000456816 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
LINC00887-204ENST00000456816 NBPF12Q5TAG4 269 aaPredicted RBP16.8■□□□□ 0.28
LINC00887-204ENST00000456816 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
LINC00887-204ENST00000456816 SH3BP5LQ7L8J4 393 aa16.8■□□□□ 0.28
LINC00887-204ENST00000456816 CDAN1Q8IWY9 1227 aa16.8■□□□□ 0.28
LINC00887-204ENST00000456816 SMC1BQ8NDV3 1235 aa16.8■□□□□ 0.28
LINC00887-204ENST00000456816 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
LINC00887-204ENST00000456816 TRAF5O00463 557 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 SEC24BO95487 1268 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 PLCD1P51178 756 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 CTDSPL2Q05D32 466 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
LINC00887-204ENST00000456816 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 DLK2Q6UY11 383 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms