RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 MANSC4A6NHS7 340 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 GOLIM4O00461 696 aa21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 INHBEP58166 350 aa21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 RHBDL3P58872 404 aa21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 AAMPQ13685 434 aa21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 SH3RF3Q8TEJ3 882 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 OPTNQ96CV9 577 aa21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 RNF186Q9NXI6 227 aa21.97■■□□□ 1.11
PDLIM2-215ENST00000456545 ATP5JP18859 108 aa21.96■■□□□ 1.11
PDLIM2-215ENST00000456545 VGLL4Q14135 290 aa21.96■■□□□ 1.11
PDLIM2-215ENST00000456545 ZKSCAN4Q969J2 545 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-215ENST00000456545 DDX4Q9NQI0 724 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-215ENST00000456545 PCNTO95613 3336 aa21.95■■□□□ 1.1
PDLIM2-215ENST00000456545 MYO5AQ9Y4I1 1855 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-215ENST00000456545 TM4SF4P48230 202 aa21.95■■□□□ 1.1
PDLIM2-215ENST00000456545 PPP4CP60510 307 aa21.95■■□□□ 1.1
PDLIM2-215ENST00000456545 TMED8Q6PL24 325 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-215ENST00000456545 SAGE1Q9NXZ1 904 aa21.95■■□□□ 1.1
PDLIM2-215ENST00000456545 NPM3O75607 178 aaKnown RBP21.94■■□□□ 1.1
PDLIM2-215ENST00000456545 CERS3Q8IU89 383 aa21.94■■□□□ 1.1
PDLIM2-215ENST00000456545 TGFBRAP1Q8WUH2 860 aa21.94■■□□□ 1.1
PDLIM2-215ENST00000456545 PAG1Q9NWQ8 432 aa21.94■■□□□ 1.1
PDLIM2-215ENST00000456545 DDTLA6NHG4 134 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 SLC9C2Q5TAH2 1124 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 OTUD7BQ6GQQ9 843 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 ADGRA1Q86SQ6 560 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 TNS4Q8IZW8 715 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 MIGA1Q8NAN2 632 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 OTUD5Q96G74 571 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 ECHDC1Q9NTX5 307 aa21.93■■□□□ 1.1
PDLIM2-215ENST00000456545 MAST2Q6P0Q8 1798 aa21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 USP5P45974 858 aa21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 DYNLL1P63167 89 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 ERO1BQ86YB8 467 aa21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 HAUS7Q99871 368 aa21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 OSBPL5Q9H0X9 879 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-215ENST00000456545 ALDH1A1P00352 501 aa21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 INPP5BP32019 993 aa21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 SH3BP5LQ7L8J4 393 aa21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 MAPKAPK5Q8IW41 473 aa21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 EXOC6Q8TAG9 804 aa21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.91■■□□□ 1.1
PDLIM2-215ENST00000456545 GJA5P36382 358 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 GTF2A2P52657 109 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 CNKSR2Q8WXI2 1034 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 GCC1Q96CN9 775 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 EDC3Q96F86 508 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 TRIM34Q9BYJ4 488 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 DHX36Q9H2U1 1008 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 RWDD1Q9H446 243 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 ZNF112Q9UJU3 913 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 SNCAIPQ9Y6H5 919 aa21.9■■□□□ 1.1
PDLIM2-215ENST00000456545 RFX7Q2KHR2 1363 aa21.89■■□□□ 1.1
PDLIM2-215ENST00000456545 OTOFQ9HC10 1997 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 MAGEB6P1A0A0J9YX57 407 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 SPDYE5A6NIY4 337 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 TBC1D8O95759 1140 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 PDE6AP16499 860 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 IFNL1Q8IU54 200 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 PICK1Q9NRD5 415 aa21.89■■□□□ 1.09
PDLIM2-215ENST00000456545 ZNF532Q9HCE3 1301 aa21.88■■□□□ 1.09
PDLIM2-215ENST00000456545 PPATQ06203 517 aa21.88■■□□□ 1.09
PDLIM2-215ENST00000456545 HDAC1Q13547 482 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-215ENST00000456545 ZSCAN25Q6NSZ9 544 aa21.88■■□□□ 1.09
PDLIM2-215ENST00000456545 PI4KBQ9UBF8 816 aa21.88■■□□□ 1.09
PDLIM2-215ENST00000456545 DOCK2Q92608 1830 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 CCL15-CCL14A0A0B4J2E2 113 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 ERC2O15083 957 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 TBC1D12O60347 775 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 HLA-DOAP06340 250 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 CCL15Q16663 113 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 CRACR2BQ8N4Y2 399 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 SAP30BPQ9UHR5 308 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 ATRNL1Q5VV63 1379 aa21.87■■□□□ 1.09
PDLIM2-215ENST00000456545 FLT1P17948 1338 aa21.86■■□□□ 1.09
PDLIM2-215ENST00000456545 CETPP11597 493 aa21.86■■□□□ 1.09
PDLIM2-215ENST00000456545 PPIL2Q13356 520 aa21.86■■□□□ 1.09
PDLIM2-215ENST00000456545 SNAPC2Q13487 334 aa21.86■■□□□ 1.09
PDLIM2-215ENST00000456545 PALD1Q9ULE6 856 aa21.86■■□□□ 1.09
PDLIM2-215ENST00000456545 PHF20L1A8MW92 1017 aa21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 IRF6O14896 467 aa21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 CTNND1O60716 968 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 MAP3K10Q02779 954 aa21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 NOL9Q5SY16 702 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 TSHZ3Q63HK5 1081 aa21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 FOXP4Q8IVH2 680 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 SCYL3Q8IZE3 742 aa21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 CRNKL1Q9BZJ0 848 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 HERC5Q9UII4 1024 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-215ENST00000456545 TTC41PQ6P2S7 1318 aa21.84■■□□□ 1.09
PDLIM2-215ENST00000456545 TESPA1A2RU30 521 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-215ENST00000456545 FAM196BA6NMK8 535 aa21.84■■□□□ 1.09
PDLIM2-215ENST00000456545 SLURP2P0DP57 97 aa21.84■■□□□ 1.09
PDLIM2-215ENST00000456545 ADD2P35612 726 aa21.84■■□□□ 1.09
PDLIM2-215ENST00000456545 MS4A4AQ96JQ5 239 aa21.84■■□□□ 1.09
PDLIM2-215ENST00000456545 CASP8AP2Q9UKL3 1982 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms