RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 SLURP2P0DP57 97 aa20.75■□□□□ 0.91
TVP23A-202ENST00000456096 HOXD10P28358 340 aa20.75■□□□□ 0.91
TVP23A-202ENST00000456096 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
TVP23A-202ENST00000456096 TFCP2Q12800 502 aa20.75■□□□□ 0.91
TVP23A-202ENST00000456096 RAET1EQ8TD07 263 aa20.75■□□□□ 0.91
TVP23A-202ENST00000456096 FAM163AQ96GL9 167 aaPredicted RBP20.75■□□□□ 0.91
TVP23A-202ENST00000456096 XAGE2Q96GT9 111 aa20.75■□□□□ 0.91
TVP23A-202ENST00000456096 PICK1Q9NRD5 415 aa20.75■□□□□ 0.91
TVP23A-202ENST00000456096 PDS5AQ29RF7 1337 aaKnown RBP20.75■□□□□ 0.91
TVP23A-202ENST00000456096 RFX7Q2KHR2 1363 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 A0A1B0GUL7 405 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 DDTLA6NHG4 134 aaPredicted RBP20.74■□□□□ 0.91
TVP23A-202ENST00000456096 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 BCRP11274 1271 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 PTPRAP18433 802 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 MAP3K10Q02779 954 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 SPTY2D1Q68D10 685 aaPredicted RBP20.74■□□□□ 0.91
TVP23A-202ENST00000456096 SLF2Q8IX21 1173 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 DDX4Q9NQI0 724 aaKnown RBP20.74■□□□□ 0.91
TVP23A-202ENST00000456096 MYPNQ86TC9 1320 aa20.74■□□□□ 0.91
TVP23A-202ENST00000456096 A0A0G2JLL6 359 aaPredicted RBP20.73■□□□□ 0.91
TVP23A-202ENST00000456096 GRK4P32298 578 aa20.73■□□□□ 0.91
TVP23A-202ENST00000456096 BTDP43251 543 aa20.73■□□□□ 0.91
TVP23A-202ENST00000456096 PICALMQ13492 652 aa20.73■□□□□ 0.91
TVP23A-202ENST00000456096 FASTKD5Q7L8L6 764 aaKnown RBP20.73■□□□□ 0.91
TVP23A-202ENST00000456096 PRRT2Q7Z6L0 340 aaPredicted RBP20.73■□□□□ 0.91
TVP23A-202ENST00000456096 AKAP2Q9Y2D5 859 aa20.73■□□□□ 0.91
TVP23A-202ENST00000456096 AFG3L2Q9Y4W6 797 aa20.73■□□□□ 0.91
TVP23A-202ENST00000456096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
TVP23A-202ENST00000456096 GNAI3P08754 354 aa20.72■□□□□ 0.91
TVP23A-202ENST00000456096 MECOMQ03112 1051 aa20.72■□□□□ 0.91
TVP23A-202ENST00000456096 MVPQ14764 893 aaKnown RBP20.72■□□□□ 0.91
TVP23A-202ENST00000456096 GADL1Q6ZQY3 521 aa20.72■□□□□ 0.91
TVP23A-202ENST00000456096 ARHGAP45Q92619 1136 aa20.72■□□□□ 0.91
TVP23A-202ENST00000456096 SHISA4Q96DD7 197 aa20.72■□□□□ 0.91
TVP23A-202ENST00000456096 MROH7-TTC4A0A0A0MT08 1334 aa20.72■□□□□ 0.91
TVP23A-202ENST00000456096 MGAMO43451 1857 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 FCGRTP55899 365 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 PRKCZQ05513 592 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 MTX1Q13505 466 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 ERICH6Q7L0X2 663 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 ZNF384Q8TF68 577 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 NEUROD6Q96NK8 337 aa20.71■□□□□ 0.91
TVP23A-202ENST00000456096 COLQQ9Y215 455 aaPredicted RBP20.71■□□□□ 0.91
TVP23A-202ENST00000456096 GPR75-ASB3A0A0A6YYF3 556 aa20.7■□□□□ 0.9
TVP23A-202ENST00000456096 H0YGN5 161 aa20.7■□□□□ 0.9
TVP23A-202ENST00000456096 CTNND1O60716 968 aaKnown RBP20.7■□□□□ 0.9
TVP23A-202ENST00000456096 HMG20BQ9P0W2 317 aa20.7■□□□□ 0.9
TVP23A-202ENST00000456096 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.7■□□□□ 0.9
TVP23A-202ENST00000456096 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
TVP23A-202ENST00000456096 RANBP2P49792 3224 aaKnown RBP20.69■□□□□ 0.9
TVP23A-202ENST00000456096 PTPRFP10586 1907 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 CCL5P13501 91 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 RHBDL3P58872 404 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 PI16Q6UXB8 463 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 GABRQQ9UN88 632 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 PHIPQ8WWQ0 1821 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 DOCK1Q14185 1865 aa20.69■□□□□ 0.9
TVP23A-202ENST00000456096 TRIOBPQ9H2D6 2365 aa20.68■□□□□ 0.9
TVP23A-202ENST00000456096 TRIM75PA6NK02 468 aa20.68■□□□□ 0.9
TVP23A-202ENST00000456096 FXR1P51114 621 aaKnown RBP eCLIP20.68■□□□□ 0.9
TVP23A-202ENST00000456096 TBC1D9Q6ZT07 1266 aa20.68■□□□□ 0.9
TVP23A-202ENST00000456096 CCDC84Q86UT8 332 aaPredicted RBP20.68■□□□□ 0.9
TVP23A-202ENST00000456096 RNF208Q9H0X6 261 aa20.68■□□□□ 0.9
TVP23A-202ENST00000456096 SLC45A1Q9Y2W3 748 aa20.68■□□□□ 0.9
TVP23A-202ENST00000456096 FAM196BA6NMK8 535 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 GJB1P08034 283 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 GJA8P48165 433 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 GORABQ5T7V8 394 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 SPATA5Q8NB90 893 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 NKX2-3Q8TAU0 364 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 NSUN4Q96CB9 384 aaKnown RBP20.67■□□□□ 0.9
TVP23A-202ENST00000456096 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
TVP23A-202ENST00000456096 TBC1D12O60347 775 aa20.66■□□□□ 0.9
TVP23A-202ENST00000456096 NPM3O75607 178 aaKnown RBP20.66■□□□□ 0.9
TVP23A-202ENST00000456096 UBXN2AP68543 259 aa20.66■□□□□ 0.9
TVP23A-202ENST00000456096 SLAIN1Q8ND83 568 aa20.66■□□□□ 0.9
TVP23A-202ENST00000456096 DPF3Q92784 378 aa20.66■□□□□ 0.9
TVP23A-202ENST00000456096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.66■□□□□ 0.9
TVP23A-202ENST00000456096 IPO8O15397 1037 aaKnown RBP20.65■□□□□ 0.9
TVP23A-202ENST00000456096 GNAI2P04899 355 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 LDHCP07864 332 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 TRIM27P14373 513 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 FLT3LGP49771 235 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 GSTO1P78417 241 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 SMCR8Q8TEV9 937 aaPredicted RBP20.65■□□□□ 0.9
TVP23A-202ENST00000456096 RAI14Q9P0K7 980 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 SZT2Q5T011 3432 aa20.65■□□□□ 0.9
TVP23A-202ENST00000456096 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.89
TVP23A-202ENST00000456096 ADCY3O60266 1144 aa20.64■□□□□ 0.89
TVP23A-202ENST00000456096 ARID4AP29374 1257 aaPredicted RBP20.64■□□□□ 0.89
TVP23A-202ENST00000456096 G3BP1Q13283 466 aaKnown RBP eCLIP20.64■□□□□ 0.89
TVP23A-202ENST00000456096 TREML2Q5T2D2 321 aa20.64■□□□□ 0.89
TVP23A-202ENST00000456096 UBE2Q1Q7Z7E8 422 aa20.64■□□□□ 0.89
TVP23A-202ENST00000456096 FRAT1Q92837 279 aaPredicted RBP20.64■□□□□ 0.89
TVP23A-202ENST00000456096 UNC93B1Q9H1C4 597 aa20.64■□□□□ 0.89
TVP23A-202ENST00000456096 AGTPBP1Q9UPW5 1226 aa20.64■□□□□ 0.89
TVP23A-202ENST00000456096 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
TVP23A-202ENST00000456096 TNPO2O14787 897 aaKnown RBP20.63■□□□□ 0.89
TVP23A-202ENST00000456096 BCAR3O75815 825 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms