RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 HAUS7Q99871 368 aa12.55□□□□□ -0.4
TOP3B-212ENST00000456075 WBP1LQ9NX94 342 aa12.55□□□□□ -0.4
TOP3B-212ENST00000456075 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 ERC2O15083 957 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 ZSCAN25Q6NSZ9 544 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-212ENST00000456075 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
TOP3B-212ENST00000456075 THSD7BQ9C0I4 1608 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 FOXN1O15353 648 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
TOP3B-212ENST00000456075 ZBTB48P10074 688 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-212ENST00000456075 PDE6AP16499 860 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 USP5P45974 858 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 PPP4CP60510 307 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 SPRYD7Q5W111 196 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 ADGRA1Q86SQ6 560 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.53□□□□□ -0.4
TOP3B-212ENST00000456075 TGFBRAP1Q8WUH2 860 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 ZIC5Q96T25 663 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 TRIM34Q9BYJ4 488 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 DDX4Q9NQI0 724 aaKnown RBP12.53□□□□□ -0.4
TOP3B-212ENST00000456075 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
TOP3B-212ENST00000456075 AK9Q5TCS8 1911 aa12.52□□□□□ -0.4
TOP3B-212ENST00000456075 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 MX1P20591 662 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 VGLL4Q14135 290 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 LRRFIP1Q32MZ4 808 aaKnown RBP12.52□□□□□ -0.41
TOP3B-212ENST00000456075 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 MAPKAPK5Q8IW41 473 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 OPTNQ96CV9 577 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.41
TOP3B-212ENST00000456075 WNK4Q96J92 1243 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 OSBPL5Q9H0X9 879 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-212ENST00000456075 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
TOP3B-212ENST00000456075 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.41
TOP3B-212ENST00000456075 DDTLA6NHG4 134 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
TOP3B-212ENST00000456075 INHBEP58166 350 aa12.51□□□□□ -0.41
TOP3B-212ENST00000456075 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 B4GALNT3Q6L9W6 998 aa12.51□□□□□ -0.41
TOP3B-212ENST00000456075 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
TOP3B-212ENST00000456075 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
TOP3B-212ENST00000456075 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 ERO1BQ86YB8 467 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 FLT1P17948 1338 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 ATRNL1Q5VV63 1379 aa12.5□□□□□ -0.41
TOP3B-212ENST00000456075 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-212ENST00000456075 TRPA1O75762 1119 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 INPP5BP32019 993 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 ADD2P35612 726 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 LBX1P52954 281 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 SH3BP5LQ7L8J4 393 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 OTUD7AQ8TE49 926 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-212ENST00000456075 SAGE1Q9NXZ1 904 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 PI4KBQ9UBF8 816 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 SAP30BPQ9UHR5 308 aaKnown RBP12.49□□□□□ -0.41
TOP3B-212ENST00000456075 HERC5Q9UII4 1024 aaKnown RBP12.49□□□□□ -0.41
TOP3B-212ENST00000456075 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
TOP3B-212ENST00000456075 DOCK2Q92608 1830 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 MBD4O95243 580 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 IGHDP01880 384 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 HSPA8P11142 646 aaKnown RBP12.48□□□□□ -0.41
TOP3B-212ENST00000456075 TM4SF4P48230 202 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 GTF2A2P52657 109 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 UBE3CQ15386 1083 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 KBTBD3Q8NAB2 608 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 RNF186Q9NXI6 227 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
TOP3B-212ENST00000456075 MYO5AQ9Y4I1 1855 aaKnown RBP12.48□□□□□ -0.41
TOP3B-212ENST00000456075 CCL15-CCL14A0A0B4J2E2 113 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 TCRBV5S4A2TA0A5A2 114 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 TBC1D12O60347 775 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 CTNND1O60716 968 aaKnown RBP12.47□□□□□ -0.41
TOP3B-212ENST00000456075 POLR3DP05423 398 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-212ENST00000456075 ZFYP08048 801 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-212ENST00000456075 PPATQ06203 517 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 PPIL2Q13356 520 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms