RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 ATP8B1O43520 1251 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 PFKFB2O60825 505 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FAM160A1Q05DH4 1040 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 GCKRQ14397 625 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 BMS1Q14692 1282 aaKnown RBP11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 NIM1KQ8IY84 436 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 BRF1Q92994 677 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 L3MBTL3Q96JM7 780 aaPredicted RBP11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FSD1Q9BTV5 496 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 C9orf78Q9NZ63 289 aaPredicted RBP11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CALCOCO1Q9P1Z2 691 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 NRBP1Q9UHY1 535 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 A0A1W2PQ27 194 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 A0A1W2PQ64 194 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 BECN2A8MW95 431 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 MYO1BO43795 1136 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 KINO60870 393 aaKnown RBP11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TPM1P09493 284 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SKILP12757 684 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TPM4P67936 248 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 AOC3Q16853 763 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 UBE3BQ7Z3V4 1068 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 GPC2Q8N158 579 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FAM227BQ96M60 508 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 NEK1Q96PY6 1258 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SRRTQ9BXP5 876 aaKnown RBP11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TAF1P21675 1872 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 GRM8O00222 908 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TAF5LO75529 589 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SASH1O94885 1247 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 H2AFXP16104 143 aaPredicted RBP11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ATP5JP18859 108 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CTSWP56202 376 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ENGASEQ8NFI3 743 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 AGXT2Q9BYV1 514 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TSPYL1Q9H0U9 437 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TFIP11Q9UBB9 837 aaKnown RBP11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ZNF215Q9UL58 517 aaPredicted RBP11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ZNRF3Q9ULT6 936 aa11.61□□□□□ -0.55
CHCHD4P3-201ENST00000455954 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 COL4A5P29400 1685 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 APLP1P51693 650 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CASP7P55210 303 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 GPSM2P81274 684 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SLC20A2Q08357 652 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SNW1Q13573 536 aaKnown RBP11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 C11orf57Q6ZUT1 292 aaPredicted RBP11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FILIP1Q7Z7B0 1213 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FCHSD1Q86WN1 690 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 DHX40Q8IX18 779 aaKnown RBP11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FBXL16Q8N461 479 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ARGLU1Q9NWB6 273 aaPredicted RBP11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 LRRC37AA6NMS7 1700 aa11.6□□□□□ -0.55
CHCHD4P3-201ENST00000455954 RTL9Q8NET4 1388 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FAM173BQ6P4H8 233 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 MRPS27Q92552 414 aaKnown RBP11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TIGD1Q96MW7 591 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 EYA3Q99504 573 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TAF1DQ9H5J8 278 aaPredicted RBP11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 GREM2Q9H772 168 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 COPRSQ9NQ92 184 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SALL1Q9NSC2 1324 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 COL4A1P02462 1669 aa11.59□□□□□ -0.55
CHCHD4P3-201ENST00000455954 SCN4AP35499 1836 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 YEATS4O95619 227 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 CSF1RP07333 972 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 EPHX2P34913 555 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 CXCL9Q07325 125 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 FBXO38Q6PIJ6 1188 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 NSUN7Q8NE18 718 aaKnown RBP11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 TBC1D16Q8TBP0 767 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 SUCLG2Q96I99 432 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 DSCC1Q9BVC3 393 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 RTEL1Q9NZ71 1219 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 POLLQ9UGP5 575 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
CHCHD4P3-201ENST00000455954 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms