RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 AXDND1Q5T1B0 1012 aaPredicted RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 NSUN4Q96CB9 384 aaKnown RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 TCEANC2Q96MN5 208 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 NEK1Q96PY6 1258 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 RTFDC1Q9BY42 306 aaPredicted RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 COA1Q9GZY4 146 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 GEMIN8Q9NWZ8 242 aaKnown RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 SNED1Q8TER0 1413 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 KIAA1551Q9HCM1 1747 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 CHD4Q14839 1912 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 G3V3G9 751 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 CAPN2P17655 700 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 RPS6KB1P23443 525 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 MECOMQ03112 1051 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 DOK7Q18PE1 504 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 CCDC93Q567U6 631 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 DALRD3Q5D0E6 543 aaKnown RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 NAA16Q6N069 864 aaPredicted RBP9.97□□□□□ -0.81
LMO3-210ENST00000453727 RNF214Q8ND24 703 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 WDR66Q8TBY9 1149 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 EFCC1Q9HA90 598 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 LMBRD1Q9NUN5 540 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 SALL1Q9NSC2 1324 aa9.97□□□□□ -0.81
LMO3-210ENST00000453727 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.81
LMO3-210ENST00000453727 E7EWF7 191 aa9.96□□□□□ -0.81
LMO3-210ENST00000453727 PRKAB2O43741 272 aa9.96□□□□□ -0.81
LMO3-210ENST00000453727 IMMTQ16891 758 aaKnown RBP9.96□□□□□ -0.81
LMO3-210ENST00000453727 RTKN2Q8IZC4 609 aa9.96□□□□□ -0.81
LMO3-210ENST00000453727 EPB41L4AQ9HCS5 686 aaPredicted RBP9.96□□□□□ -0.81
LMO3-210ENST00000453727 MAGEB6P1A0A0J9YX57 407 aa9.96□□□□□ -0.82
LMO3-210ENST00000453727 SYCE3A1L190 88 aa9.96□□□□□ -0.82
LMO3-210ENST00000453727 CUL4AQ13619 759 aa9.96□□□□□ -0.82
LMO3-210ENST00000453727 GRIK5Q16478 980 aa9.96□□□□□ -0.82
LMO3-210ENST00000453727 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
LMO3-210ENST00000453727 ZGPATQ8N5A5 531 aaKnown RBP9.96□□□□□ -0.82
LMO3-210ENST00000453727 RIOK1Q9BRS2 568 aaKnown RBP9.96□□□□□ -0.82
LMO3-210ENST00000453727 DBNDD1Q9H9R9 158 aa9.96□□□□□ -0.82
LMO3-210ENST00000453727 ERICH4A6NGS2 130 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 GSG1L2A8MUP6 293 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 RIOK3O14730 519 aaKnown RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 PRPF40AO75400 957 aaKnown RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 DYNLL1P63167 89 aaKnown RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 GTF2IP78347 998 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 AOC3Q16853 763 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 PODNQ7Z5L7 613 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 SUPT20HQ8NEM7 779 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 LIMCH1Q9UPQ0 1083 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 SLC4A4Q9Y6R1 1079 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 BRCA1P38398 1863 aaKnown RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 ZNF213O14771 459 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 LARGE1O95461 756 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 LDHBP07195 334 aaKnown RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 GNAT2P19087 354 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 ALX1Q15699 326 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 MFSD14BQ5SR56 506 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 SOGA3Q5TF21 947 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 SPTY2D1Q68D10 685 aaPredicted RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 NLGN2Q8NFZ4 835 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 RBM27Q9P2N5 1060 aaKnown RBP9.95□□□□□ -0.82
LMO3-210ENST00000453727 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
LMO3-210ENST00000453727 PPIP5K2O43314 1243 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 FAM193AP78312 1265 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 DZIP1Q86YF9 867 aaKnown RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 SDR42E1Q8WUS8 393 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 PSMD1Q99460 953 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 NAPBQ9H115 298 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 SPTLC3Q9NUV7 552 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 ZMYM6O95789 1325 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 CTIFO43310 598 aaKnown RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 ECE2O60344 883 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 DHX32Q7L7V1 743 aaKnown RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 KRT222Q8N1A0 295 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 TBC1D22AQ8WUA7 517 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 ZBTB9Q96C00 473 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 LRRC2Q9BYS8 371 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 AATFQ9NY61 560 aaKnown RBP eCLIP9.94□□□□□ -0.82
LMO3-210ENST00000453727 TPCN1Q9ULQ1 816 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
LMO3-210ENST00000453727 FAM205AQ6ZU69 1335 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
LMO3-210ENST00000453727 EXOSC10Q01780 885 aaKnown RBP9.93□□□□□ -0.82
LMO3-210ENST00000453727 ME3Q16798 604 aa9.93□□□□□ -0.82
LMO3-210ENST00000453727 Q6ZUG5 572 aa9.93□□□□□ -0.82
LMO3-210ENST00000453727 TBC1D10CQ8IV04 446 aa9.93□□□□□ -0.82
LMO3-210ENST00000453727 FHDC1Q9C0D6 1143 aaPredicted RBP9.93□□□□□ -0.82
LMO3-210ENST00000453727 TSPY26PQ9H489 355 aa9.93□□□□□ -0.82
LMO3-210ENST00000453727 KCNQ5Q9NR82 932 aa9.93□□□□□ -0.82
LMO3-210ENST00000453727 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
LMO3-210ENST00000453727 BAZ2AQ9UIF9 1905 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms