RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 TNRC18O15417 2968 aaPredicted RBP18.98■□□□□ 0.63
VCX3B-204ENST00000453306 IDH1O75874 414 aaKnown RBP18.98■□□□□ 0.63
VCX3B-204ENST00000453306 SDSP20132 328 aa18.98■□□□□ 0.63
VCX3B-204ENST00000453306 CRKP46108 304 aa18.98■□□□□ 0.63
VCX3B-204ENST00000453306 APOBEC3HQ6NTF7 200 aaKnown RBP18.98■□□□□ 0.63
VCX3B-204ENST00000453306 IFNL1Q8IU54 200 aa18.98■□□□□ 0.63
VCX3B-204ENST00000453306 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
VCX3B-204ENST00000453306 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
VCX3B-204ENST00000453306 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.98■□□□□ 0.63
VCX3B-204ENST00000453306 PDE6AP16499 860 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 RASA3Q14644 834 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 SPTY2D1Q68D10 685 aaPredicted RBP18.97■□□□□ 0.63
VCX3B-204ENST00000453306 ANKRD13AQ8IZ07 590 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
VCX3B-204ENST00000453306 MRIQ9BWK5 157 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 FZD1Q9UP38 647 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 DAGLAQ9Y4D2 1042 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 ECM29Q5VYK3 1845 aa18.97■□□□□ 0.63
VCX3B-204ENST00000453306 HDLBPQ00341 1268 aaKnown RBP18.96■□□□□ 0.63
VCX3B-204ENST00000453306 TTF1Q15361 905 aaPredicted RBP18.96■□□□□ 0.63
VCX3B-204ENST00000453306 NBPF12Q5TAG4 269 aaPredicted RBP18.96■□□□□ 0.63
VCX3B-204ENST00000453306 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
VCX3B-204ENST00000453306 FAM163AQ96GL9 167 aaPredicted RBP18.96■□□□□ 0.63
VCX3B-204ENST00000453306 GAKO14976 1311 aa18.96■□□□□ 0.63
VCX3B-204ENST00000453306 SSC5DA1L4H1 1573 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 CYP7A1P22680 504 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 ADD2P35612 726 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 TNNI2P48788 182 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 SPDYE2Q495Y8 402 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 HHIPL2Q6UWX4 724 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 EVI5LQ96CN4 794 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 CLMNQ96JQ2 1002 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
VCX3B-204ENST00000453306 USP2O75604 605 aaPredicted RBP18.94■□□□□ 0.62
VCX3B-204ENST00000453306 MAP3K12Q12852 859 aa18.94■□□□□ 0.62
VCX3B-204ENST00000453306 NAA16Q6N069 864 aaPredicted RBP18.94■□□□□ 0.62
VCX3B-204ENST00000453306 DZIP1Q86YF9 867 aaKnown RBP18.94■□□□□ 0.62
VCX3B-204ENST00000453306 ZNF70Q9UC06 446 aaPredicted RBP18.94■□□□□ 0.62
VCX3B-204ENST00000453306 ZNF532Q9HCE3 1301 aa18.94■□□□□ 0.62
VCX3B-204ENST00000453306 GPR75-ASB3A0A0A6YYF3 556 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 RHBDL3P58872 404 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 DYNLL1P63167 89 aaKnown RBP18.93■□□□□ 0.62
VCX3B-204ENST00000453306 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 RILPL2Q969X0 211 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 SEC62Q99442 399 aaKnown RBP18.93■□□□□ 0.62
VCX3B-204ENST00000453306 R3HDMLQ9H3Y0 253 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 TDRD3Q9H7E2 651 aaKnown RBP18.93■□□□□ 0.62
VCX3B-204ENST00000453306 MROH7-TTC4A0A0A0MT08 1334 aa18.93■□□□□ 0.62
VCX3B-204ENST00000453306 RNF113AO15541 343 aaKnown RBP18.92■□□□□ 0.62
VCX3B-204ENST00000453306 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
VCX3B-204ENST00000453306 ERO1AQ96HE7 468 aa18.92■□□□□ 0.62
VCX3B-204ENST00000453306 FSD1Q9BTV5 496 aa18.92■□□□□ 0.62
VCX3B-204ENST00000453306 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
VCX3B-204ENST00000453306 TRIM17Q9Y577 477 aa18.92■□□□□ 0.62
VCX3B-204ENST00000453306 IGF2BP3O00425 579 aaKnown RBP eCLIP18.91■□□□□ 0.62
VCX3B-204ENST00000453306 UBE3CQ15386 1083 aa18.91■□□□□ 0.62
VCX3B-204ENST00000453306 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
VCX3B-204ENST00000453306 CDC42EP5Q6NZY7 148 aa18.91■□□□□ 0.62
VCX3B-204ENST00000453306 FAM227BQ96M60 508 aa18.91■□□□□ 0.62
VCX3B-204ENST00000453306 RIOK1Q9BRS2 568 aaKnown RBP18.91■□□□□ 0.62
VCX3B-204ENST00000453306 IL25Q9H293 177 aa18.91■□□□□ 0.62
VCX3B-204ENST00000453306 BTDP43251 543 aa18.9■□□□□ 0.62
VCX3B-204ENST00000453306 CACNB3P54284 484 aa18.9■□□□□ 0.62
VCX3B-204ENST00000453306 PPP4CP60510 307 aa18.9■□□□□ 0.62
VCX3B-204ENST00000453306 ZMYM1Q5SVZ6 1142 aa18.9■□□□□ 0.62
VCX3B-204ENST00000453306 PRPF38BQ5VTL8 546 aaKnown RBP18.9■□□□□ 0.62
VCX3B-204ENST00000453306 OPTNQ96CV9 577 aa18.9■□□□□ 0.62
VCX3B-204ENST00000453306 MAST3O60307 1309 aa18.9■□□□□ 0.62
VCX3B-204ENST00000453306 MYO5AQ9Y4I1 1855 aaKnown RBP18.89■□□□□ 0.61
VCX3B-204ENST00000453306 TESPA1A2RU30 521 aaPredicted RBP18.89■□□□□ 0.61
VCX3B-204ENST00000453306 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 M0R2C6 588 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 IGSF3O75054 1194 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 GSTO1P78417 241 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 OTOP1Q7RTM1 612 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 HOOK2Q96ED9 719 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 ELP3Q9H9T3 547 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 AATFQ9NY61 560 aaKnown RBP eCLIP18.89■□□□□ 0.61
VCX3B-204ENST00000453306 TMOD2Q9NZR1 351 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 CSADQ9Y600 493 aa18.89■□□□□ 0.61
VCX3B-204ENST00000453306 A0A0D9SFI3 127 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 LDHCP07864 332 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 GJA5P36382 358 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 NFIAQ12857 509 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
VCX3B-204ENST00000453306 CRHR2Q13324 411 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 ARHGEF6Q15052 776 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 ZFPM1Q8IX07 1006 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 LCORLQ8N3X6 602 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 SH3RF3Q8TEJ3 882 aaPredicted RBP18.88■□□□□ 0.61
VCX3B-204ENST00000453306 TEPSINQ96N21 525 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.88■□□□□ 0.61
VCX3B-204ENST00000453306 USP40Q9NVE5 1235 aa18.88■□□□□ 0.61
VCX3B-204ENST00000453306 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
VCX3B-204ENST00000453306 LAMB1P07942 1786 aa18.87■□□□□ 0.61
VCX3B-204ENST00000453306 CHMLP26374 656 aa18.87■□□□□ 0.61
VCX3B-204ENST00000453306 GTF2A2P52657 109 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms