RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 MAP3K12Q12852 859 aa24.24■■□□□ 1.47
COL9A3-202ENST00000452372 NOM1Q5C9Z4 860 aaKnown RBP24.24■■□□□ 1.47
COL9A3-202ENST00000452372 TMED8Q6PL24 325 aaPredicted RBP24.24■■□□□ 1.47
COL9A3-202ENST00000452372 WNK4Q96J92 1243 aa24.24■■□□□ 1.47
COL9A3-202ENST00000452372 GPR25O00155 361 aa24.23■■□□□ 1.47
COL9A3-202ENST00000452372 GOLIM4O00461 696 aa24.23■■□□□ 1.47
COL9A3-202ENST00000452372 NFIAQ12857 509 aa24.23■■□□□ 1.47
COL9A3-202ENST00000452372 FAM151AQ8WW52 585 aa24.23■■□□□ 1.47
COL9A3-202ENST00000452372 IDI2Q9BXS1 227 aa24.23■■□□□ 1.47
COL9A3-202ENST00000452372 PAG1Q9NWQ8 432 aa24.23■■□□□ 1.47
COL9A3-202ENST00000452372 LAMB1P07942 1786 aa24.22■■□□□ 1.47
COL9A3-202ENST00000452372 ZBTB48P10074 688 aaPredicted RBP24.22■■□□□ 1.47
COL9A3-202ENST00000452372 RHBDL3P58872 404 aa24.22■■□□□ 1.47
COL9A3-202ENST00000452372 PPP4CP60510 307 aa24.22■■□□□ 1.47
COL9A3-202ENST00000452372 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.22■■□□□ 1.47
COL9A3-202ENST00000452372 FAM198AQ9UFP1 575 aa24.22■■□□□ 1.47
COL9A3-202ENST00000452372 TTC41PQ6P2S7 1318 aa24.21■■□□□ 1.47
COL9A3-202ENST00000452372 MANSC4A6NHS7 340 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-202ENST00000452372 BAG3O95817 575 aa24.21■■□□□ 1.47
COL9A3-202ENST00000452372 INHBEP58166 350 aa24.21■■□□□ 1.47
COL9A3-202ENST00000452372 ADGRA1Q86SQ6 560 aa24.21■■□□□ 1.47
COL9A3-202ENST00000452372 IFNL1Q8IU54 200 aa24.21■■□□□ 1.47
COL9A3-202ENST00000452372 MAGEB6Q8N7X4 407 aa24.21■■□□□ 1.47
COL9A3-202ENST00000452372 OTUD7AQ8TE49 926 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-202ENST00000452372 EDC3Q96F86 508 aaKnown RBP24.21■■□□□ 1.47
COL9A3-202ENST00000452372 NOL10Q9BSC4 688 aaKnown RBP24.21■■□□□ 1.47
COL9A3-202ENST00000452372 TNRC18O15417 2968 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-202ENST00000452372 IGF2BP3O00425 579 aaKnown RBP eCLIP24.2■■□□□ 1.46
COL9A3-202ENST00000452372 WDHD1O75717 1129 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-202ENST00000452372 CYP7A1P22680 504 aa24.2■■□□□ 1.46
COL9A3-202ENST00000452372 IREB2P48200 963 aaKnown RBP24.2■■□□□ 1.46
COL9A3-202ENST00000452372 MLLT1Q03111 559 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-202ENST00000452372 RPAP1Q9BWH6 1393 aaPredicted RBP24.19■■□□□ 1.46
COL9A3-202ENST00000452372 SALL3Q9BXA9 1300 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 ENTPD3O75355 529 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 RGS3P49796 1198 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 TCP10Q12799 353 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 TSHZ3Q63HK5 1081 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 B4GALNT3Q6L9W6 998 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.19■■□□□ 1.46
COL9A3-202ENST00000452372 ANKRD13AQ8IZ07 590 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 AATFQ9NY61 560 aaKnown RBP eCLIP24.19■■□□□ 1.46
COL9A3-202ENST00000452372 OTOFQ9HC10 1997 aa24.19■■□□□ 1.46
COL9A3-202ENST00000452372 RFX7Q2KHR2 1363 aa24.18■■□□□ 1.46
COL9A3-202ENST00000452372 NPM3O75607 178 aaKnown RBP24.18■■□□□ 1.46
COL9A3-202ENST00000452372 MX1P20591 662 aa24.18■■□□□ 1.46
COL9A3-202ENST00000452372 SLC9C2Q5TAH2 1124 aa24.18■■□□□ 1.46
COL9A3-202ENST00000452372 ERC2O15083 957 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 PDE6AP16499 860 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 PLCG2P16885 1265 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 NUCB1Q02818 461 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 ZFPM1Q8IX07 1006 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 PI4K2BQ8TCG2 481 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 HOOK2Q96ED9 719 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 PTPN18Q99952 460 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 DDX4Q9NQI0 724 aaKnown RBP24.17■■□□□ 1.46
COL9A3-202ENST00000452372 AK9Q5TCS8 1911 aa24.17■■□□□ 1.46
COL9A3-202ENST00000452372 TESPA1A2RU30 521 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-202ENST00000452372 FKTNO75072 461 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 GLRX3O76003 335 aaKnown RBP24.16■■□□□ 1.46
COL9A3-202ENST00000452372 ALDH1A1P00352 501 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 CHD1LQ86WJ1 897 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 CERS3Q8IU89 383 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 TEX11Q8IYF3 940 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 SH3RF3Q8TEJ3 882 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-202ENST00000452372 LNPKQ9C0E8 428 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 STAP2Q9UGK3 403 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 HPS5Q9UPZ3 1129 aa24.16■■□□□ 1.46
COL9A3-202ENST00000452372 PICALMQ13492 652 aa24.15■■□□□ 1.46
COL9A3-202ENST00000452372 PKN2Q16513 984 aaKnown RBP24.15■■□□□ 1.46
COL9A3-202ENST00000452372 CNKSR2Q8WXI2 1034 aa24.15■■□□□ 1.46
COL9A3-202ENST00000452372 MS4A4AQ96JQ5 239 aa24.15■■□□□ 1.46
COL9A3-202ENST00000452372 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.15■■□□□ 1.46
COL9A3-202ENST00000452372 ELP3Q9H9T3 547 aa24.15■■□□□ 1.46
COL9A3-202ENST00000452372 TCRBV5S4A2TA0A5A2 114 aa24.14■■□□□ 1.45
COL9A3-202ENST00000452372 DYNLL1P63167 89 aaKnown RBP24.14■■□□□ 1.45
COL9A3-202ENST00000452372 MAP3K9P80192 1104 aa24.14■■□□□ 1.45
COL9A3-202ENST00000452372 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.14■■□□□ 1.45
COL9A3-202ENST00000452372 ZNF532Q9HCE3 1301 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 ADD2P35612 726 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 PDE1AP54750 535 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 SOX10P56693 466 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 SH3BP5LQ7L8J4 393 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 MIGA1Q8NAN2 632 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 OPTNQ96CV9 577 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 PDE4DIPQ5VU43 2346 aa24.13■■□□□ 1.45
COL9A3-202ENST00000452372 MYH7P12883 1935 aa24.12■■□□□ 1.45
COL9A3-202ENST00000452372 VGLL4Q14135 290 aa24.12■■□□□ 1.45
COL9A3-202ENST00000452372 DCAF15Q66K64 600 aa24.12■■□□□ 1.45
COL9A3-202ENST00000452372 ZSCAN25Q6NSZ9 544 aa24.12■■□□□ 1.45
COL9A3-202ENST00000452372 KBTBD3Q8NAB2 608 aa24.12■■□□□ 1.45
COL9A3-202ENST00000452372 CDK5RAP2Q96SN8 1893 aa24.11■■□□□ 1.45
COL9A3-202ENST00000452372 DDTLA6NHG4 134 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-202ENST00000452372 CENPBP07199 599 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-202ENST00000452372 UBE3CQ15386 1083 aa24.11■■□□□ 1.45
COL9A3-202ENST00000452372 ZSCAN29Q8IWY8 852 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-202ENST00000452372 TGFBRAP1Q8WUH2 860 aa24.11■■□□□ 1.45
COL9A3-202ENST00000452372 RIOK1Q9BRS2 568 aaKnown RBP24.11■■□□□ 1.45
COL9A3-202ENST00000452372 OSBPL5Q9H0X9 879 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-202ENST00000452372 HTTP42858 3142 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms