RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ENTPD3O75355 529 aa13.51□□□□□ -0.25
USP1-204ENST00000452143 MTX1Q13505 466 aa13.51□□□□□ -0.25
USP1-204ENST00000452143 RASGRF1Q13972 1273 aa13.51□□□□□ -0.25
USP1-204ENST00000452143 DZIP1Q86YF9 867 aaKnown RBP13.51□□□□□ -0.25
USP1-204ENST00000452143 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
USP1-204ENST00000452143 PARK7Q99497 189 aaKnown RBP13.51□□□□□ -0.25
USP1-204ENST00000452143 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
USP1-204ENST00000452143 MAST2Q6P0Q8 1798 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 CXCL11O14625 94 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 GNAI3P08754 354 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 MOGSQ13724 837 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
USP1-204ENST00000452143 MEIS3Q99687 375 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 PA2G4Q9UQ80 394 aaKnown RBP13.5□□□□□ -0.25
USP1-204ENST00000452143 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
USP1-204ENST00000452143 COL2A1P02458 1487 aaPredicted RBP13.49□□□□□ -0.25
USP1-204ENST00000452143 ATAD5Q96QE3 1844 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 HOXD10P28358 340 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 ADORA1P30542 326 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 RGS3P49796 1198 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
USP1-204ENST00000452143 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
USP1-204ENST00000452143 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
USP1-204ENST00000452143 LHX8Q68G74 356 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 SCYL3Q8IZE3 742 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 SRRDQ9UH36 339 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 CPA4Q9UI42 421 aa13.49□□□□□ -0.25
USP1-204ENST00000452143 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 MROH7-TTC4A0A0A0MT08 1334 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
USP1-204ENST00000452143 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 PSMC4P43686 418 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
USP1-204ENST00000452143 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
USP1-204ENST00000452143 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
USP1-204ENST00000452143 ZFPM1Q8IX07 1006 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 TRIM47Q96LD4 638 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 ABCF2Q9UG63 623 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 SLC45A1Q9Y2W3 748 aa13.48□□□□□ -0.25
USP1-204ENST00000452143 TRIOBPQ9H2D6 2365 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 MYPNQ86TC9 1320 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 MAP4K4O95819 1239 aaPredicted RBP13.47□□□□□ -0.25
USP1-204ENST00000452143 PTPRAP18433 802 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 OSBPP22059 807 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 CTGFP29279 349 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 BTDP43251 543 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 ZSCAN29Q8IWY8 852 aaPredicted RBP13.47□□□□□ -0.25
USP1-204ENST00000452143 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 RAET1EQ8TD07 263 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 XAGE2Q96GT9 111 aa13.47□□□□□ -0.25
USP1-204ENST00000452143 RANBP2P49792 3224 aaKnown RBP13.47□□□□□ -0.25
USP1-204ENST00000452143 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 CTNND1O60716 968 aaKnown RBP13.46□□□□□ -0.25
USP1-204ENST00000452143 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.25
USP1-204ENST00000452143 BCRP11274 1271 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 GRK4P32298 578 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 FCGRTP55899 365 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 TIMM10P62072 90 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 TFCP2Q12800 502 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 GPAT2Q6NUI2 795 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 SH3BP5LQ7L8J4 393 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 AFG3L2Q9Y4W6 797 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
USP1-204ENST00000452143 FOCADQ5VW36 1801 aa13.46□□□□□ -0.26
USP1-204ENST00000452143 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
USP1-204ENST00000452143 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
USP1-204ENST00000452143 MYCP01106 439 aaPredicted RBP13.45□□□□□ -0.26
USP1-204ENST00000452143 CYP2C8P10632 490 aa13.45□□□□□ -0.26
USP1-204ENST00000452143 GSTO1P78417 241 aa13.45□□□□□ -0.26
USP1-204ENST00000452143 MECOMQ03112 1051 aa13.45□□□□□ -0.26
USP1-204ENST00000452143 PICALMQ13492 652 aa13.45□□□□□ -0.26
USP1-204ENST00000452143 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
USP1-204ENST00000452143 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
USP1-204ENST00000452143 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
USP1-204ENST00000452143 CDK5RAP2Q96SN8 1893 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 DDTLA6NHG4 134 aaPredicted RBP13.44□□□□□ -0.26
USP1-204ENST00000452143 TBC1D12O60347 775 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 GABBR2O75899 941 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
USP1-204ENST00000452143 RHBDL3P58872 404 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 SPATA5Q8NB90 893 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 SLAIN1Q8ND83 568 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 SHISA4Q96DD7 197 aa13.44□□□□□ -0.26
USP1-204ENST00000452143 GNAI2P04899 355 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 LDHCP07864 332 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 GJB1P08034 283 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 TRIM27P14373 513 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 UBXN2AP68543 259 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 PRKCZQ05513 592 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 MTFR1Q15390 333 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 ATF7IPQ6VMQ6 1270 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
USP1-204ENST00000452143 SMCR8Q8TEV9 937 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms