RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SSH3Q8TE77 659 aa26.52■■□□□ 1.84
C9orf3-208ENST00000451893 IDI2Q9BXS1 227 aa26.52■■□□□ 1.84
C9orf3-208ENST00000451893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.52■■□□□ 1.84
C9orf3-208ENST00000451893 RLBP1P12271 317 aa26.51■■□□□ 1.83
C9orf3-208ENST00000451893 TBC1D9Q6ZT07 1266 aa26.51■■□□□ 1.83
C9orf3-208ENST00000451893 FAM43AQ8N2R8 423 aa26.51■■□□□ 1.83
C9orf3-208ENST00000451893 EFCC1Q9HA90 598 aa26.51■■□□□ 1.83
C9orf3-208ENST00000451893 GPR108Q9NPR9 543 aa26.51■■□□□ 1.83
C9orf3-208ENST00000451893 PICK1Q9NRD5 415 aa26.51■■□□□ 1.83
C9orf3-208ENST00000451893 KIF22Q14807 665 aa26.5■■□□□ 1.83
C9orf3-208ENST00000451893 OTOP1Q7RTM1 612 aa26.5■■□□□ 1.83
C9orf3-208ENST00000451893 FAM163AQ96GL9 167 aaPredicted RBP26.5■■□□□ 1.83
C9orf3-208ENST00000451893 ZBTB7BO15156 539 aaPredicted RBP26.49■■□□□ 1.83
C9orf3-208ENST00000451893 MCAMP43121 646 aa26.49■■□□□ 1.83
C9orf3-208ENST00000451893 ZFPM1Q8IX07 1006 aa26.49■■□□□ 1.83
C9orf3-208ENST00000451893 PANK1Q8TE04 598 aa26.49■■□□□ 1.83
C9orf3-208ENST00000451893 DBNDD2Q9BQY9 259 aa26.48■■□□□ 1.83
C9orf3-208ENST00000451893 SNRKQ9NRH2 765 aa26.48■■□□□ 1.83
C9orf3-208ENST00000451893 GPR75-ASB3A0A0A6YYF3 556 aa26.47■■□□□ 1.83
C9orf3-208ENST00000451893 BTBD19C9JJ37 291 aa26.47■■□□□ 1.83
C9orf3-208ENST00000451893 NSUN4Q96CB9 384 aaKnown RBP26.47■■□□□ 1.83
C9orf3-208ENST00000451893 ZCCHC17Q9NP64 241 aaKnown RBP26.47■■□□□ 1.83
C9orf3-208ENST00000451893 ZNF112Q9UJU3 913 aa26.47■■□□□ 1.83
C9orf3-208ENST00000451893 BAG3O95817 575 aa26.46■■□□□ 1.83
C9orf3-208ENST00000451893 NOL9Q5SY16 702 aaKnown RBP26.46■■□□□ 1.83
C9orf3-208ENST00000451893 NAA16Q6N069 864 aaPredicted RBP26.46■■□□□ 1.83
C9orf3-208ENST00000451893 MAP4K4O95819 1239 aaPredicted RBP26.45■■□□□ 1.82
C9orf3-208ENST00000451893 ERC1Q8IUD2 1116 aa26.45■■□□□ 1.82
C9orf3-208ENST00000451893 TEX11Q8IYF3 940 aa26.45■■□□□ 1.82
C9orf3-208ENST00000451893 DDX4Q9NQI0 724 aaKnown RBP26.45■■□□□ 1.82
C9orf3-208ENST00000451893 MAST2Q6P0Q8 1798 aa26.44■■□□□ 1.82
C9orf3-208ENST00000451893 PDE3AQ14432 1141 aa26.44■■□□□ 1.82
C9orf3-208ENST00000451893 CEP85Q6P2H3 762 aa26.44■■□□□ 1.82
C9orf3-208ENST00000451893 SCYL3Q8IZE3 742 aa26.44■■□□□ 1.82
C9orf3-208ENST00000451893 CCDC8Q9H0W5 538 aaPredicted RBP26.44■■□□□ 1.82
C9orf3-208ENST00000451893 DDTLA6NHG4 134 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-208ENST00000451893 TLR2O60603 784 aa26.43■■□□□ 1.82
C9orf3-208ENST00000451893 HSP90AB4PQ58FF6 505 aa26.43■■□□□ 1.82
C9orf3-208ENST00000451893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.43■■□□□ 1.822e-7■■■□□ 18.7
C9orf3-208ENST00000451893 PPP4R2Q9NY27 417 aa26.43■■□□□ 1.82
C9orf3-208ENST00000451893 PTPN22Q9Y2R2 807 aa26.43■■□□□ 1.82
C9orf3-208ENST00000451893 NOP58Q9Y2X3 529 aaKnown RBP26.43■■□□□ 1.82
C9orf3-208ENST00000451893 PLCG2P16885 1265 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 ANKRD23Q86SG2 305 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 BCL11AQ9H165 835 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 CHMP4BQ9H444 224 aaKnown RBP26.42■■□□□ 1.82
C9orf3-208ENST00000451893 EXOC6BQ9Y2D4 811 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 ZHX2Q9Y6X8 837 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 DOCK1Q14185 1865 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 RFX7Q2KHR2 1363 aa26.42■■□□□ 1.82
C9orf3-208ENST00000451893 PDHXO00330 501 aa26.41■■□□□ 1.82
C9orf3-208ENST00000451893 RHBDL3P58872 404 aa26.41■■□□□ 1.82
C9orf3-208ENST00000451893 IRX6P78412 446 aaPredicted RBP26.41■■□□□ 1.82
C9orf3-208ENST00000451893 TRIM34Q9BYJ4 488 aa26.41■■□□□ 1.82
C9orf3-208ENST00000451893 AATFQ9NY61 560 aaKnown RBP eCLIP26.41■■□□□ 1.82
C9orf3-208ENST00000451893 DDX19BQ9UMR2 479 aa26.41■■□□□ 1.82
C9orf3-208ENST00000451893 KCNH4Q9UQ05 1017 aa26.41■■□□□ 1.82
C9orf3-208ENST00000451893 HMMRO75330 724 aa26.4■■□□□ 1.82
C9orf3-208ENST00000451893 ECM2O94769 699 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-208ENST00000451893 GADL1Q6ZQY3 521 aa26.4■■□□□ 1.82
C9orf3-208ENST00000451893 SH3BP5LQ7L8J4 393 aa26.4■■□□□ 1.82
C9orf3-208ENST00000451893 CXCL11O14625 94 aa26.39■■□□□ 1.82
C9orf3-208ENST00000451893 CTNND1O60716 968 aaKnown RBP26.39■■□□□ 1.82
C9orf3-208ENST00000451893 ZAP70P43403 619 aa26.39■■□□□ 1.82
C9orf3-208ENST00000451893 FASTKD5Q7L8L6 764 aaKnown RBP26.39■■□□□ 1.82
C9orf3-208ENST00000451893 AACSQ86V21 672 aa26.39■■□□□ 1.82
C9orf3-208ENST00000451893 ZNF384Q8TF68 577 aa26.39■■□□□ 1.82
C9orf3-208ENST00000451893 PARK7Q99497 189 aaKnown RBP26.39■■□□□ 1.82
C9orf3-208ENST00000451893 OSBPL5Q9H0X9 879 aaPredicted RBP26.39■■□□□ 1.82
C9orf3-208ENST00000451893 DBNLQ9UJU6 430 aaKnown RBP26.39■■□□□ 1.82
C9orf3-208ENST00000451893 ATRNL1Q5VV63 1379 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 PHF20L1A8MW92 1017 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 APBB1O00213 710 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 NPM3O75607 178 aaKnown RBP26.38■■□□□ 1.81
C9orf3-208ENST00000451893 PTPRAP18433 802 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 NBPF11Q86T75 865 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 SH3RF3Q8TEJ3 882 aaPredicted RBP26.38■■□□□ 1.81
C9orf3-208ENST00000451893 ZNF512BQ96KM6 892 aaPredicted RBP26.38■■□□□ 1.81
C9orf3-208ENST00000451893 CPA4Q9UI42 421 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 COG6Q9Y2V7 657 aa26.38■■□□□ 1.81
C9orf3-208ENST00000451893 IDH1O75874 414 aaKnown RBP26.37■■□□□ 1.81
C9orf3-208ENST00000451893 CYP2E1P05181 493 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-208ENST00000451893 SLC9C1Q4G0N8 1177 aa26.37■■□□□ 1.81
C9orf3-208ENST00000451893 TLR7Q9NYK1 1049 aaKnown RBP26.37■■□□□ 1.81
C9orf3-208ENST00000451893 MYO5AQ9Y4I1 1855 aaKnown RBP26.36■■□□□ 1.81
C9orf3-208ENST00000451893 TRIM75PA6NK02 468 aa26.36■■□□□ 1.81
C9orf3-208ENST00000451893 FAM196BA6NMK8 535 aa26.36■■□□□ 1.81
C9orf3-208ENST00000451893 EAF2Q96CJ1 260 aaPredicted RBP26.36■■□□□ 1.81
C9orf3-208ENST00000451893 TBC1D12O60347 775 aa26.35■■□□□ 1.81
C9orf3-208ENST00000451893 LACTBP83111 547 aaPredicted RBP26.35■■□□□ 1.81
C9orf3-208ENST00000451893 CRACR2BQ8N4Y2 399 aaPredicted RBP26.35■■□□□ 1.81
C9orf3-208ENST00000451893 TGFBRAP1Q8WUH2 860 aa26.35■■□□□ 1.81
C9orf3-208ENST00000451893 TMEM106CQ9BVX2 250 aa26.35■■□□□ 1.81
C9orf3-208ENST00000451893 DHX36Q9H2U1 1008 aaKnown RBP26.35■■□□□ 1.81
C9orf3-208ENST00000451893 IGSF3O75054 1194 aa26.34■■□□□ 1.81
C9orf3-208ENST00000451893 CYP7A1P22680 504 aa26.34■■□□□ 1.81
C9orf3-208ENST00000451893 MAPKAPK5Q8IW41 473 aa26.34■■□□□ 1.81
C9orf3-208ENST00000451893 CLASRPQ8N2M8 674 aaKnown RBP26.34■■□□□ 1.81
C9orf3-208ENST00000451893 IL1RAPL2Q9NP60 686 aa26.34■■□□□ 1.81
C9orf3-208ENST00000451893 COL2A1P02458 1487 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms