RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 MBD4O95243 580 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 PPP4CP60510 307 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
CCDC171-203ENST00000449575 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
CCDC171-203ENST00000449575 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 EVX2Q03828 476 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 NMIQ13287 307 aaPredicted RBP11.83□□□□□ -0.52
CCDC171-203ENST00000449575 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
CCDC171-203ENST00000449575 RASA3Q14644 834 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 SLC4A8Q2Y0W8 1093 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
CCDC171-203ENST00000449575 APPBP2Q92624 585 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 TEPSINQ96N21 525 aa11.83□□□□□ -0.52
CCDC171-203ENST00000449575 PITPNM2Q9BZ72 1349 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 SSC5DA1L4H1 1573 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 SMIM22K7EJ46 135 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
CCDC171-203ENST00000449575 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-203ENST00000449575 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
CCDC171-203ENST00000449575 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 SH3BP5LQ7L8J4 393 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-203ENST00000449575 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 NBPF12Q5TAG4 269 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-203ENST00000449575 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 ZNF408Q9H9D4 720 aa11.82□□□□□ -0.52
CCDC171-203ENST00000449575 DDTLA6NHG4 134 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-203ENST00000449575 FOXP2O15409 715 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 GPAA1O43292 621 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 BAG3O95817 575 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-203ENST00000449575 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 APOBEC3FQ8IUX4 373 aaKnown RBP11.81□□□□□ -0.52
CCDC171-203ENST00000449575 CDCA5Q96FF9 252 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
CCDC171-203ENST00000449575 NOL10Q9BSC4 688 aaKnown RBP11.81□□□□□ -0.52
CCDC171-203ENST00000449575 IDI2Q9BXS1 227 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 PASKQ96RG2 1323 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 VPS53Q5VIR6 699 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 CST9Q5W186 159 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 MOB2Q70IA6 237 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
CCDC171-203ENST00000449575 FLT1P17948 1338 aa11.81□□□□□ -0.52
CCDC171-203ENST00000449575 CHMLP26374 656 aa11.8□□□□□ -0.52
CCDC171-203ENST00000449575 PRKG1Q13976 671 aa11.8□□□□□ -0.52
CCDC171-203ENST00000449575 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
CCDC171-203ENST00000449575 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
CCDC171-203ENST00000449575 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
CCDC171-203ENST00000449575 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
CCDC171-203ENST00000449575 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
CCDC171-203ENST00000449575 MYH8P13535 1937 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 FAM196BA6NMK8 535 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 IGSF3O75054 1194 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 HTRA3P83110 453 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-203ENST00000449575 EPB41L4AQ9HCS5 686 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-203ENST00000449575 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 GSG1L2A8MUP6 293 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 PLCG2P16885 1265 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 USP5P45974 858 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 FKBP1CQ5VVH2 108 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 MIGA2Q7L4E1 593 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-203ENST00000449575 RRAGDQ9NQL2 400 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-203ENST00000449575 DIAPH3Q9NSV4 1193 aa11.79□□□□□ -0.52
CCDC171-203ENST00000449575 CELF2O95319 508 aaKnown RBP11.78□□□□□ -0.52
CCDC171-203ENST00000449575 CYP2D6P10635 497 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 TNFAIP1Q13829 316 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 MCMDC2Q4G0Z9 681 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 ZSCAN29Q8IWY8 852 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-203ENST00000449575 NAP1L5Q96NT1 182 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-203ENST00000449575 LAMB1P07942 1786 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 CLCN1P35523 988 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 FSTL1Q12841 308 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-203ENST00000449575 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
CCDC171-203ENST00000449575 HELLSQ9NRZ9 838 aa11.78□□□□□ -0.52
CCDC171-203ENST00000449575 ATAD5Q96QE3 1844 aa11.77□□□□□ -0.52
CCDC171-203ENST00000449575 ENTPD3O75355 529 aa11.77□□□□□ -0.52
CCDC171-203ENST00000449575 TNNI2P48788 182 aa11.77□□□□□ -0.52
CCDC171-203ENST00000449575 PLCD1P51178 756 aa11.77□□□□□ -0.52
CCDC171-203ENST00000449575 LRRFIP1Q32MZ4 808 aaKnown RBP11.77□□□□□ -0.52
CCDC171-203ENST00000449575 CSRNP1Q96S65 589 aa11.77□□□□□ -0.53
CCDC171-203ENST00000449575 ATRNL1Q5VV63 1379 aa11.77□□□□□ -0.53
CCDC171-203ENST00000449575 CCDC171Q6TFL3 1326 aa11.76□□□□□ -0.53
CCDC171-203ENST00000449575 C1QTNF8P60827 252 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms