RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 FEZ2Q9UHY8 353 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-204ENST00000449510 LUC7L2Q9Y383 392 aaKnown RBP14.04□□□□□ -0.16
UBE3B-204ENST00000449510 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 RBL2Q08999 1139 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 NYAP1Q6ZVC0 841 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 BCAS4Q8TDM0 211 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 RABGGTAQ92696 567 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 SCLT1Q96NL6 688 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-204ENST00000449510 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
UBE3B-204ENST00000449510 GOLGA6L7A0A1B0GV03 622 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 UBA7P41226 1012 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 NR5A1Q13285 461 aa14.04□□□□□ -0.16
UBE3B-204ENST00000449510 RIN2Q8WYP3 895 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-204ENST00000449510 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 ATL3Q6DD88 541 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 JAG2Q9Y219 1238 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 FHOD1Q9Y613 1164 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 UHRF1BP1LA0JNW5 1464 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 ADORA1P30542 326 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 SEPT11Q9NVA2 429 aaKnown RBP14.03□□□□□ -0.16
UBE3B-204ENST00000449510 VPS54Q9P1Q0 977 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 JRKLQ9Y4A0 524 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 SMIM23A6NLE4 172 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 KCNA6P17658 529 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 OSBP2Q969R2 916 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 XAGE2Q96GT9 111 aa14.03□□□□□ -0.16
UBE3B-204ENST00000449510 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-204ENST00000449510 TEX33O43247 280 aa14.02□□□□□ -0.16
UBE3B-204ENST00000449510 ATP2B2Q01814 1243 aa14.02□□□□□ -0.16
UBE3B-204ENST00000449510 SRGAP1Q7Z6B7 1085 aa14.02□□□□□ -0.16
UBE3B-204ENST00000449510 KCNH5Q8NCM2 988 aa14.02□□□□□ -0.16
UBE3B-204ENST00000449510 PLXNC1O60486 1568 aa14.02□□□□□ -0.16
UBE3B-204ENST00000449510 CCDC196A0A1B0GTZ2 297 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 TMCO5BA8MYB1 307 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 TADA3O75528 432 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 ERLIN2O94905 339 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 NOP2P46087 812 aaKnown RBP14.02□□□□□ -0.17
UBE3B-204ENST00000449510 KIF5AQ12840 1032 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 MAP3K12Q12852 859 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 IQCEQ6IPM2 695 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 BICDL1Q6ZP65 573 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 PROSER2Q86WR7 435 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-204ENST00000449510 CCDC42Q96M95 316 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 SLC4A4Q9Y6R1 1079 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-204ENST00000449510 SYNRGQ9UMZ2 1314 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 MYOM2P54296 1465 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 USO1O60763 962 aaKnown RBP14.02□□□□□ -0.17
UBE3B-204ENST00000449510 USP5P45974 858 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 PRPF4BQ13523 1007 aaKnown RBP14.02□□□□□ -0.17
UBE3B-204ENST00000449510 CNGA4Q8IV77 575 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 CEP89Q96ST8 783 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 HELLSQ9NRZ9 838 aa14.02□□□□□ -0.17
UBE3B-204ENST00000449510 GOLGA6BA6NDN3 693 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 HSF2BPO75031 334 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 GCP02774 474 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 INPP5BP32019 993 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 CXCR5P32302 372 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 CASP8Q14790 479 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 MAGEB6Q8N7X4 407 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 PPM1EQ8WY54 764 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 ZNF274Q96GC6 653 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-204ENST00000449510 LCMT1Q9UIC8 334 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 CDC23Q9UJX2 597 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 RNF40O75150 1001 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 BRD3Q15059 726 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 ARMT1Q9H993 441 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 M0R2C6 588 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 STX10O60499 249 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 KRT18P05783 430 aaKnown RBP14.01□□□□□ -0.17
UBE3B-204ENST00000449510 STAT6P42226 847 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 KIF23Q02241 960 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-204ENST00000449510 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 MLKLQ8NB16 471 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 OSBPL5Q9H0X9 879 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-204ENST00000449510 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
UBE3B-204ENST00000449510 EYA2O00167 538 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 KRT86O43790 486 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 MBD4O95243 580 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
UBE3B-204ENST00000449510 HAUS7Q99871 368 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 CAPN7Q9Y6W3 813 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
UBE3B-204ENST00000449510 MAST3O60307 1309 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 FRMD3A2A2Y4 597 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 KIF28PB7ZC32 967 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 CUTAO60888 179 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 CTAGE1Q96RT6 745 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 PHLPP2Q6ZVD8 1323 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 GUCY2FP51841 1108 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 GNGT1P63211 74 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 IFFO1Q0D2I5 559 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
UBE3B-204ENST00000449510 SPTY2D1Q68D10 685 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms