RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 UBASH3AP57075 661 aa19.43■□□□□ 0.7
SNHG17-207ENST00000449469 KRBA2Q6ZNG9 492 aa19.43■□□□□ 0.7
SNHG17-207ENST00000449469 MICU3Q86XE3 530 aa19.43■□□□□ 0.7
SNHG17-207ENST00000449469 KRI1Q8N9T8 703 aaKnown RBP19.43■□□□□ 0.7
SNHG17-207ENST00000449469 ZNF330Q9Y3S2 320 aaPredicted RBP19.43■□□□□ 0.7
SNHG17-207ENST00000449469 SLC12A7Q9Y666 1083 aa19.43■□□□□ 0.7
SNHG17-207ENST00000449469 UBN2Q6ZU65 1347 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 B4E1Z4 1266 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 LMOD1P29536 600 aaPredicted RBP19.42■□□□□ 0.7
SNHG17-207ENST00000449469 CDC27P30260 824 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 MAP3K12Q12852 859 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 GOLGA6L9A6NEM1 432 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 SERPINC1P01008 464 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 FAM193AP78312 1265 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 SART3Q15020 963 aaKnown RBP19.42■□□□□ 0.7
SNHG17-207ENST00000449469 RAB11FIP4Q86YS3 637 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 TMTC2Q8N394 836 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 CNNM3Q8NE01 707 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
SNHG17-207ENST00000449469 NAPBQ9H115 298 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 HSD3B7Q9H2F3 369 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 TMX1Q9H3N1 280 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
SNHG17-207ENST00000449469 CCDC196A0A1B0GTZ2 297 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 FGFR2P21802 821 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 CCDC93Q567U6 631 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 NOSTRINQ8IVI9 506 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 VSTM4Q8IW00 320 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 TRIM22Q8IYM9 498 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 KRT222Q8N1A0 295 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 TRIML1Q8N9V2 468 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 ZNF579Q8NAF0 562 aaKnown RBP19.41■□□□□ 0.7
SNHG17-207ENST00000449469 FOXP1Q9H334 677 aaPredicted RBP19.41■□□□□ 0.7
SNHG17-207ENST00000449469 CHD4Q14839 1912 aa19.41■□□□□ 0.7
SNHG17-207ENST00000449469 ZSCAN12O43309 604 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 SLC5A1P13866 664 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 ETF1P62495 437 aaKnown RBP19.4■□□□□ 0.7
SNHG17-207ENST00000449469 RILPL1Q5EBL4 403 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 XIRP1Q702N8 1843 aaKnown RBP19.4■□□□□ 0.7
SNHG17-207ENST00000449469 EVA1CP58658 441 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 CT47A1Q5JQC4 288 aaPredicted RBP19.4■□□□□ 0.7
SNHG17-207ENST00000449469 PIGBQ92521 554 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 CCDC34Q96HJ3 373 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 AIFM3Q96NN9 605 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 FAM217BQ9NTX9 383 aaPredicted RBP19.4■□□□□ 0.7
SNHG17-207ENST00000449469 CEP131Q9UPN4 1083 aa19.4■□□□□ 0.7
SNHG17-207ENST00000449469 PNPLA7Q6ZV29 1317 aa19.39■□□□□ 0.7
SNHG17-207ENST00000449469 IFIT3O14879 490 aaKnown RBP19.39■□□□□ 0.69
SNHG17-207ENST00000449469 RANBP6O60518 1105 aaKnown RBP19.39■□□□□ 0.69
SNHG17-207ENST00000449469 MMP1P03956 469 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 TOP1P11387 765 aaKnown RBP19.39■□□□□ 0.69
SNHG17-207ENST00000449469 PHKA1P46020 1223 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 PPP2R5BQ15173 497 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 CFAP100Q494V2 611 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 AKNAD1Q5T1N1 836 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 NT5DC1Q5TFE4 455 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
SNHG17-207ENST00000449469 CREBRFQ8IUR6 639 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 IFNL3Q8IZI9 196 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 MLKLQ8NB16 471 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 PHKBQ93100 1093 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
SNHG17-207ENST00000449469 ARHGAP6O43182 974 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 KMT5BQ4FZB7 885 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 STAG1Q8WVM7 1258 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 FAM53CQ9NYF3 392 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 WWC3Q9ULE0 1092 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 ASAP1Q9ULH1 1129 aa19.39■□□□□ 0.69
SNHG17-207ENST00000449469 PNOCQ13519 176 aa19.38■□□□□ 0.69
SNHG17-207ENST00000449469 ELF2Q15723 593 aa19.38■□□□□ 0.69
SNHG17-207ENST00000449469 HLFQ16534 295 aa19.38■□□□□ 0.69
SNHG17-207ENST00000449469 SYT10Q6XYQ8 523 aa19.38■□□□□ 0.69
SNHG17-207ENST00000449469 SPATA5Q8NB90 893 aa19.38■□□□□ 0.69
SNHG17-207ENST00000449469 RNF41Q9H4P4 317 aaPredicted RBP19.38■□□□□ 0.69
SNHG17-207ENST00000449469 ITGB4P16144 1822 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 DEXIO95424 95 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 NAA30Q147X3 362 aaPredicted RBP19.37■□□□□ 0.69
SNHG17-207ENST00000449469 MFSD6Q6ZSS7 791 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 HOMER1Q86YM7 354 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 SLC26A6Q9BXS9 759 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNHG17-207ENST00000449469 ERICH2A1L162 156 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 TPM1P09493 284 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 CYP19A1P11511 503 aaPredicted RBP19.37■□□□□ 0.69
SNHG17-207ENST00000449469 ATP1A3P13637 1013 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 PTPREP23469 700 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 GPTP24298 496 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 RTN1Q16799 776 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 ZSWIM5Q9P217 1185 aa19.37■□□□□ 0.69
SNHG17-207ENST00000449469 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.37■□□□□ 0.69
SNHG17-207ENST00000449469 BCL9O00512 1426 aa19.36■□□□□ 0.69
SNHG17-207ENST00000449469 H2AFXP16104 143 aaPredicted RBP19.36■□□□□ 0.69
SNHG17-207ENST00000449469 IL6STP40189 918 aaPredicted RBP19.36■□□□□ 0.69
SNHG17-207ENST00000449469 MDM2Q00987 491 aaPredicted RBP19.36■□□□□ 0.69
SNHG17-207ENST00000449469 FBXO38Q6PIJ6 1188 aa19.36■□□□□ 0.69
SNHG17-207ENST00000449469 EPB41L4AQ9HCS5 686 aaPredicted RBP19.36■□□□□ 0.69
SNHG17-207ENST00000449469 PCDHA5Q9Y5H7 936 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms