RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 IGSF3O75054 1194 aa12.86□□□□□ -0.35
SMPD4-211ENST00000449159 GSPT1P15170 499 aaKnown RBP12.86□□□□□ -0.35
SMPD4-211ENST00000449159 ZFPM1Q8IX07 1006 aa12.86□□□□□ -0.35
SMPD4-211ENST00000449159 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
SMPD4-211ENST00000449159 TMOD2Q9NZR1 351 aa12.86□□□□□ -0.35
SMPD4-211ENST00000449159 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
SMPD4-211ENST00000449159 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
SMPD4-211ENST00000449159 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 AOC2O75106 756 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 RGS3P49796 1198 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 PPP4CP60510 307 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 TCP10Q12799 353 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 PICALMQ13492 652 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 TNFAIP1Q13829 316 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 UBE3CQ15386 1083 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 FKBP1CQ5VVH2 108 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
SMPD4-211ENST00000449159 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
SMPD4-211ENST00000449159 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
SMPD4-211ENST00000449159 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 RNF113AO15541 343 aaKnown RBP12.84□□□□□ -0.35
SMPD4-211ENST00000449159 BAG3O95817 575 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-211ENST00000449159 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 FAM83AQ86UY5 434 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 IDI2Q9BXS1 227 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 PUS7LQ9H0K6 701 aaKnown RBP12.84□□□□□ -0.35
SMPD4-211ENST00000449159 ARMT1Q9H993 441 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 FZD1Q9UP38 647 aa12.84□□□□□ -0.35
SMPD4-211ENST00000449159 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-211ENST00000449159 M0R2C6 588 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 MBD4O95243 580 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 SLC34A2O95436 690 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 TNNI2P48788 182 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 MLLT1Q03111 559 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-211ENST00000449159 TMED8Q6PL24 325 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-211ENST00000449159 SH3BP5LQ7L8J4 393 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 MAPKAPK5Q8IW41 473 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 OSBP2Q969R2 916 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
SMPD4-211ENST00000449159 PPP2R3BQ9Y5P8 575 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 FLT1P17948 1338 aa12.83□□□□□ -0.36
SMPD4-211ENST00000449159 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-211ENST00000449159 PLCG2P16885 1265 aa12.82□□□□□ -0.36
SMPD4-211ENST00000449159 SDSP20132 328 aa12.82□□□□□ -0.36
SMPD4-211ENST00000449159 NOGQ13253 232 aa12.82□□□□□ -0.36
SMPD4-211ENST00000449159 PRKG1Q13976 671 aa12.82□□□□□ -0.36
SMPD4-211ENST00000449159 MOB2Q70IA6 237 aa12.82□□□□□ -0.36
SMPD4-211ENST00000449159 APPBP2Q92624 585 aa12.82□□□□□ -0.36
SMPD4-211ENST00000449159 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-211ENST00000449159 PRKAB2O43741 272 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 ENTPD3O75355 529 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 ZMYM1Q5SVZ6 1142 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 SDR42E1Q8WUS8 393 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-211ENST00000449159 LAMB1P07942 1786 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
SMPD4-211ENST00000449159 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 GPAA1O43292 621 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 HUNKP57058 714 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 SLC4A8Q2Y0W8 1093 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 CCDC129Q6ZRS4 1044 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 STRBPQ96SI9 672 aaKnown RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
SMPD4-211ENST00000449159 MYH8P13535 1937 aa12.8□□□□□ -0.36
SMPD4-211ENST00000449159 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 ATAD5Q96QE3 1844 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 NF2P35240 595 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 USP5P45974 858 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 RGS19P49795 217 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 EVX2Q03828 476 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 SUPT20HL1Q3ZLR7 823 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
SMPD4-211ENST00000449159 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
SMPD4-211ENST00000449159 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
SMPD4-211ENST00000449159 DGKZQ13574 1117 aa12.78□□□□□ -0.36
SMPD4-211ENST00000449159 TTLL12Q14166 644 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-211ENST00000449159 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms