RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ZC3H4Q9UPT8 1303 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 ZMYND10O75800 440 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 RBL2Q08999 1139 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 ACRBPQ8NEB7 543 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 SGSM3Q96HU1 749 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 SLC24A3Q9HC58 644 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 AGLP35573 1532 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 COL15A1P39059 1388 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 FSBPO95073 299 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 SLC39A14Q15043 492 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 NUTM2AQ8IVF1 878 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 FOXP4Q8IVH2 680 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 ZNF274Q96GC6 653 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 TEX13AQ9BXU3 409 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 AGPSO00116 658 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 GCFC2P16383 781 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 PREPLQ4J6C6 727 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 METTL16Q86W50 562 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 JMYQ8N9B5 988 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 RNF217Q8TC41 542 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 N4BP2Q86UW6 1770 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 ABL1P00519 1130 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 ZNF18P17022 549 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 PAX7P23759 505 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 ARHGAP25P42331 645 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 NR1I3Q14994 352 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 TEX11Q8IYF3 940 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 TBC1D22AQ8WUA7 517 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 FAXDC2Q96IV6 333 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 SAMSN1Q9NSI8 373 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 ANXA1P04083 346 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 BMP6P22004 513 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 MCMDC2Q4G0Z9 681 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 SHC4Q6S5L8 630 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 FMNL3Q8IVF7 1028 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 GSPT2Q8IYD1 628 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 CHPF2Q9P2E5 772 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 GRIN2DO15399 1336 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 TEX33O43247 280 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 CHGBP05060 677 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 AMPHP49418 695 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 EXOSC10Q01780 885 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 BIRC2Q13490 618 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 KLC4Q9NSK0 619 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 DACH1Q9UI36 760 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 HPSEQ9Y251 543 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 SIGLEC1Q9BZZ2 1709 aa10.67□□□□□ -0.7
SYNPO2-204ENST00000448416 ANKRD18AQ8IVF6 992 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 ENOX1Q8TC92 643 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 MYO1AQ9UBC5 1043 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 SBNO1A3KN83 1393 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 KIF28PB7ZC32 967 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 KIF3CO14782 793 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 ERCC3P19447 782 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 CDR1P51861 262 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 MAP2K1Q02750 393 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 CEP85LQ5SZL2 805 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 RNF187Q5TA31 235 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 NAIF1Q69YI7 327 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 MICALCLQ6ZW33 695 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 SARNPP82979 210 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 AMPD2Q01433 879 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 ACTN3Q08043 901 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 SPATS2Q86XZ4 545 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 AGXT2Q9BYV1 514 aa10.66□□□□□ -0.7
SYNPO2-204ENST00000448416 FOXN1O15353 648 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 IL17REQ8NFR9 667 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 A0A1B0GTH6 734 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 TMCO5BA8MYB1 307 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 CASP14P31944 242 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 ZNF827Q17R98 1081 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 MLKLQ8NB16 471 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 MAN1B1Q9UKM7 699 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 CPLX1O14810 134 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 MFAP3LO75121 409 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 MMS19Q96T76 1030 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 KCNH3Q9ULD8 1083 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 ALKQ9UM73 1620 aa10.65□□□□□ -0.7
SYNPO2-204ENST00000448416 RIMS1Q86UR5 1692 aaKnown RBP10.65□□□□□ -0.71
SYNPO2-204ENST00000448416 ATXN2Q99700 1313 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 TARSL2A2RTX5 802 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 ENC1O14682 589 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms