RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PPP2R5AQ15172 486 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 TTF1Q15361 905 aaPredicted RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 MAP9Q49MG5 647 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 C6orf15Q6UXA7 325 aaPredicted RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 RIPOR1Q6ZS17 1223 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 TSHZ1Q6ZSZ6 1077 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 KRTAP1-3Q8IUG1 177 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 FAM178BQ8IXR5 827 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 REXO1Q8N1G1 1221 aaKnown RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 RBBP8NLQ8NC74 664 aaPredicted RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 NEDD1Q8NHV4 660 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 OSMRQ99650 979 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 ZKSCAN3Q9BRR0 538 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 LRRC4BQ9NT99 713 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 FAM221AA4D161 298 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 SHISA8B8ZZ34 492 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 OIP5O43482 229 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 PDE8AO60658 829 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 CAND2O75155 1236 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 SASH3O75995 380 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
PMS1-216ENST00000447734 POU3F3P20264 500 aaPredicted RBP5.05□□□□□ -1.6
PMS1-216ENST00000447734 ITPKAP23677 461 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 GRIA4P48058 902 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 RALBP1Q15311 655 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 NFE2Q16621 373 aaPredicted RBP5.05□□□□□ -1.6
PMS1-216ENST00000447734 PERM1Q5SV97 790 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 WWC2Q6AWC2 1192 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 KRT25Q7Z3Z0 450 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 PODNQ7Z5L7 613 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 NCAPG2Q86XI2 1143 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 C19orf47Q8N9M1 422 aaKnown RBP5.05□□□□□ -1.6
PMS1-216ENST00000447734 OR13H1Q8NG92 308 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 GMCL1Q96IK5 515 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 UBA5Q9GZZ9 404 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 BRD7Q9NPI1 651 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 SEC31BQ9NQW1 1179 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 PCDHB5Q9Y5E4 795 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 COMMD10Q9Y6G5 202 aa5.05□□□□□ -1.6
PMS1-216ENST00000447734 A0A1W2PNR3 127 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 HMGB1P1B2RPK0 211 aaPredicted RBP5.04□□□□□ -1.6
PMS1-216ENST00000447734 MMP20O60882 483 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 CILPO75339 1184 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 KRT18P05783 430 aaKnown RBP5.04□□□□□ -1.6
PMS1-216ENST00000447734 FAM153BP0C7A2 387 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 POU4F2Q12837 409 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 PABPC4Q13310 644 aaKnown RBP eCLIP5.04□□□□□ -1.6
PMS1-216ENST00000447734 HDAC1Q13547 482 aaPredicted RBP5.04□□□□□ -1.6
PMS1-216ENST00000447734 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 EEPD1Q7L9B9 569 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 ATL2Q8NHH9 583 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 SLC26A8Q96RN1 970 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 BCCIPQ9P287 314 aaKnown RBP eCLIP5.04□□□□□ -1.6
PMS1-216ENST00000447734 SAMM50Q9Y512 469 aa5.04□□□□□ -1.6
PMS1-216ENST00000447734 A0A087X0B3 334 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 A0A1B0GTH6 734 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 A0A1W2PQH9 124 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 METTL12A8MUP2 240 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 RASGRP1O95267 797 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 RARAP10276 462 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 ACPPP15309 386 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 TARSP26639 723 aaKnown RBP5.03□□□□□ -1.6
PMS1-216ENST00000447734 MSX1P28360 303 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 C4orf46Q504U0 113 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
PMS1-216ENST00000447734 MRM1Q6IN84 353 aaKnown RBP5.03□□□□□ -1.6
PMS1-216ENST00000447734 RUFY4Q6ZNE9 571 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 TTC6Q86TZ1 520 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 UBR7Q8N806 425 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 GAS2L1Q99501 681 aaPredicted RBP5.03□□□□□ -1.6
PMS1-216ENST00000447734 APBA2Q99767 749 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 SPATA9Q9BWV2 254 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 ZNF576Q9H609 170 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 PCDHB14Q9Y5E9 798 aa5.03□□□□□ -1.6
PMS1-216ENST00000447734 WASHC2CQ9Y4E1 1318 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 A0A096LPE4 126 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 CCDC163A0A0D9SF12 145 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 A0A1W2PPZ6 126 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 SHTN1A0MZ66 631 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 SH3BP5O60239 455 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 TRPA1O75762 1119 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 KIF4AO95239 1232 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 SCGB1D2O95969 90 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 MYL1P05976 194 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 ATF3P18847 181 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 GUCY2FP51841 1108 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 PPP2R3AQ06190 1150 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 FAAP100Q0VG06 881 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 HYAL2Q12891 473 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 CCINQ13939 588 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 SAFB2Q14151 953 aaKnown RBP eCLIP5.02□□□□□ -1.61
PMS1-216ENST00000447734 BRD3Q15059 726 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 LONRF2Q1L5Z9 754 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 ZC3H12BQ5HYM0 836 aaKnown RBP5.02□□□□□ -1.61
PMS1-216ENST00000447734 HGSNATQ68CP4 663 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 PPP4R4Q6NUP7 873 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 RNF180Q86T96 592 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 LRRC47Q8N1G4 583 aaKnown RBP5.02□□□□□ -1.61
PMS1-216ENST00000447734 ASAP3Q8TDY4 903 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 MPHOSPH6Q99547 160 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms