RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 SPTLC2O15270 562 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 RANBP6O60518 1105 aaKnown RBP18.91■□□□□ 0.62
OTUB1-204ENST00000447683 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
OTUB1-204ENST00000447683 KIAA2012Q0VF49 1180 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 CAVIN4Q5BKX8 364 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 KRT40Q6A162 431 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 SYNE3Q6ZMZ3 975 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 BICDL1Q6ZP65 573 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 FAM84BQ96KN1 310 aaPredicted RBP18.91■□□□□ 0.62
OTUB1-204ENST00000447683 TAF1LQ8IZX4 1826 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
OTUB1-204ENST00000447683 PHKBQ93100 1093 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 RNF41Q9H4P4 317 aaPredicted RBP18.91■□□□□ 0.62
OTUB1-204ENST00000447683 ABCF2Q9UG63 623 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 ANAPC4Q9UJX5 808 aa18.91■□□□□ 0.62
OTUB1-204ENST00000447683 MAGEB6P1A0A0J9YX57 407 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 TPM3P06753 285 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
OTUB1-204ENST00000447683 RIOK1Q9BRS2 568 aaKnown RBP18.9■□□□□ 0.62
OTUB1-204ENST00000447683 IFNAR1P17181 557 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 PPARAQ07869 468 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 SF3A1Q15459 793 aaKnown RBP18.9■□□□□ 0.62
OTUB1-204ENST00000447683 STX1AQ16623 288 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 SMIM5Q71RC9 77 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 FBXO33Q7Z6M2 555 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 MPNDQ8N594 471 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 ZNF830Q96NB3 372 aaPredicted RBP18.9■□□□□ 0.62
OTUB1-204ENST00000447683 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 TTC12Q9H892 705 aaPredicted RBP18.9■□□□□ 0.62
OTUB1-204ENST00000447683 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
OTUB1-204ENST00000447683 LY75O60449 1722 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 SEMA3EO15041 775 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 RCAN1P53805 252 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 IQCB1Q15051 598 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 VPS37DQ86XT2 251 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 CCDC144CPQ8IYA2 1237 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 TMTC2Q8N394 836 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 SETDB2Q96T68 719 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 BAZ2AQ9UIF9 1905 aaKnown RBP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 MYH2Q9UKX2 1941 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 FMNL1O95466 1100 aaPredicted RBP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 U2AF2P26368 475 aaKnown RBP eCLIP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 PIBF1Q8WXW3 757 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 NLRP3Q96P20 1036 aa18.89■□□□□ 0.61
OTUB1-204ENST00000447683 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 PDS5AQ29RF7 1337 aaKnown RBP18.89■□□□□ 0.61
OTUB1-204ENST00000447683 A0A1B0GVL5 298 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 SSRP1Q08945 709 aaKnown RBP18.88■□□□□ 0.61
OTUB1-204ENST00000447683 WTAPQ15007 396 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 SLC39A14Q15043 492 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 RRP12Q5JTH9 1297 aaKnown RBP18.88■□□□□ 0.61
OTUB1-204ENST00000447683 AXDND1Q5T1B0 1012 aaPredicted RBP18.88■□□□□ 0.61
OTUB1-204ENST00000447683 PLA2G4DQ86XP0 818 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 GOLGA6L6A8MZA4 724 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 NDUFA8P51970 172 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 C11orf57Q6ZUT1 292 aaPredicted RBP18.88■□□□□ 0.61
OTUB1-204ENST00000447683 SDR42E1Q8WUS8 393 aa18.88■□□□□ 0.61
OTUB1-204ENST00000447683 NBPF5PQ86XG9 351 aaPredicted RBP18.87■□□□□ 0.61
OTUB1-204ENST00000447683 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
OTUB1-204ENST00000447683 GNPATO15228 680 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ZPR1O75312 459 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 CMA1P23946 247 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.86■□□□□ 0.61
OTUB1-204ENST00000447683 WASF1Q92558 559 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 BRIP1Q9BX63 1249 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ANO10Q9NW15 660 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 MYH6P13533 1939 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ERICH2A1L162 156 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ZBTB22O15209 634 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ZNF75DP51815 510 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 TRIM29Q14134 588 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 RTN1Q16799 776 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 SLC26A6Q9BXS9 759 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 ANKRD2Q9GZV1 360 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 SBF2Q86WG5 1849 aa18.86■□□□□ 0.61
OTUB1-204ENST00000447683 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 UBAP1LF5GYI3 381 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 PPP6R2O75170 966 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 SEC23AQ15436 765 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 TPTE2Q6XPS3 522 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.85■□□□□ 0.61
OTUB1-204ENST00000447683 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
OTUB1-204ENST00000447683 RTCBQ9Y3I0 505 aaKnown RBP18.85■□□□□ 0.61
OTUB1-204ENST00000447683 CCDC88AQ3V6T2 1871 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 DLEC1Q9Y238 1755 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 PTPAQ15257 358 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 SARM1Q6SZW1 724 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 NBPF11Q86T75 865 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 MAP3K14Q99558 947 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 KCNF1Q9H3M0 494 aa18.85■□□□□ 0.61
OTUB1-204ENST00000447683 CCDC196A0A1B0GTZ2 297 aa18.84■□□□□ 0.61
OTUB1-204ENST00000447683 MINDY4BA8MYZ0 360 aa18.84■□□□□ 0.61
OTUB1-204ENST00000447683 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms