RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 DIS3LQ8TF46 1054 aaKnown RBP8.98□□□□□ -0.97
LRRC28-203ENST00000447360 FAM151AQ8WW52 585 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 COA7Q96BR5 231 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 ZNF594Q96JF6 807 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-203ENST00000447360 ZMYND8Q9ULU4 1186 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-203ENST00000447360 TTC28Q96AY4 2481 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 MAST3O60307 1309 aa8.98□□□□□ -0.97
LRRC28-203ENST00000447360 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
LRRC28-203ENST00000447360 A0A0G2JLL6 359 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 POTEB2H3BUK9 544 aa8.97□□□□□ -0.97
LRRC28-203ENST00000447360 FRAT2O75474 233 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 TWISTNBQ3B726 338 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 CAVIN4Q5BKX8 364 aa8.97□□□□□ -0.97
LRRC28-203ENST00000447360 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
LRRC28-203ENST00000447360 PRRT2Q7Z6L0 340 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
LRRC28-203ENST00000447360 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-203ENST00000447360 RPTORQ8N122 1335 aa8.97□□□□□ -0.97
LRRC28-203ENST00000447360 CDH23Q9H251 3354 aa8.96□□□□□ -0.97
LRRC28-203ENST00000447360 SYN1P17600 705 aa8.96□□□□□ -0.98
LRRC28-203ENST00000447360 CHAF1AQ13111 956 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-203ENST00000447360 EPHA10Q5JZY3 1008 aa8.96□□□□□ -0.98
LRRC28-203ENST00000447360 SMCR8Q8TEV9 937 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-203ENST00000447360 C11orf49Q9H6J7 331 aa8.96□□□□□ -0.98
LRRC28-203ENST00000447360 ZHX2Q9Y6X8 837 aa8.96□□□□□ -0.98
LRRC28-203ENST00000447360 MROH5Q6ZUA9 1318 aa8.96□□□□□ -0.98
LRRC28-203ENST00000447360 DNAH12Q6ZR08 3092 aa8.96□□□□□ -0.98
LRRC28-203ENST00000447360 HMGCRP04035 888 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 BEND3Q5T5X7 828 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 TSR2Q969E8 191 aaKnown RBP8.95□□□□□ -0.98
LRRC28-203ENST00000447360 GUCD1Q96NT3 240 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-203ENST00000447360 PICK1Q9NRD5 415 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 OGDHLQ9ULD0 1010 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-203ENST00000447360 AFG3L2Q9Y4W6 797 aa8.95□□□□□ -0.98
LRRC28-203ENST00000447360 PHF20L1A8MW92 1017 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 GRM8O00222 908 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 PTPRAP18433 802 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 ZEB1P37275 1124 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-203ENST00000447360 TCP10Q12799 353 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 FAM110CQ1W6H9 321 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 GADL1Q6ZQY3 521 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 SCYL3Q8IZE3 742 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 PUS3Q9BZE2 481 aaKnown RBP8.94□□□□□ -0.98
LRRC28-203ENST00000447360 KIF16BQ96L93 1317 aa8.94□□□□□ -0.98
LRRC28-203ENST00000447360 PDE8BO95263 885 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 MAP3K10Q02779 954 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 NFIAQ12857 509 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 CDC42EP5Q6NZY7 148 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 ANKRD13CQ8N6S4 541 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 WDR66Q8TBY9 1149 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 C9orf78Q9NZ63 289 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-203ENST00000447360 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 GJD2Q9UKL4 321 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 PNMA3Q9UL41 463 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 AGTPBP1Q9UPW5 1226 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 SSUH2Q9Y2M2 353 aa8.93□□□□□ -0.98
LRRC28-203ENST00000447360 ATRNL1Q5VV63 1379 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 PFASO15067 1338 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 COL6A1P12109 1028 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 GCLCP48506 637 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-203ENST00000447360 CCDC27Q2M243 656 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 METTL24Q5JXM2 366 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 MAP3K21Q5TCX8 1036 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 VGLL2Q8N8G2 317 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
LRRC28-203ENST00000447360 PRKRIP1Q9H875 184 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-203ENST00000447360 DAGLAQ9Y4D2 1042 aa8.92□□□□□ -0.98
LRRC28-203ENST00000447360 A0A1B0GUL6 1792 aa8.91□□□□□ -0.98
LRRC28-203ENST00000447360 IL16Q14005 1332 aa8.91□□□□□ -0.98
LRRC28-203ENST00000447360 F6X3S4 739 aa8.91□□□□□ -0.98
LRRC28-203ENST00000447360 CTNND1O60716 968 aaKnown RBP8.91□□□□□ -0.98
LRRC28-203ENST00000447360 ZNF697Q5TEC3 545 aa8.91□□□□□ -0.98
LRRC28-203ENST00000447360 MIER1Q8N108 512 aa8.91□□□□□ -0.98
LRRC28-203ENST00000447360 PROCA1Q8NCQ7 364 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-203ENST00000447360 USP40Q9NVE5 1235 aa8.91□□□□□ -0.98
LRRC28-203ENST00000447360 LRRFIP2Q9Y608 721 aaKnown RBP8.91□□□□□ -0.98
LRRC28-203ENST00000447360 COL2A1P02458 1487 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 TRIM75PA6NK02 468 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 ENTPD3O75355 529 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 VAMP4O75379 141 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 ALDH1L1O75891 902 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 IFIT1P09914 478 aaKnown RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 XRCC5P13010 732 aaKnown RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 TRIM32Q13049 653 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 PABPC4Q13310 644 aaKnown RBP eCLIP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 PUM3Q15397 648 aaKnown RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 RABL6Q3YEC7 729 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 LRRC24Q50LG9 513 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 TREML2Q5T2D2 321 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 WWC1Q8IX03 1113 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 ZFPM1Q8IX07 1006 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 TRMT44Q8IYL2 757 aaKnown RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 MAFAQ8NHW3 353 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 KAZALD1Q96I82 304 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms