RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CNTNAP1P78357 1384 aa21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 SLC4A8Q2Y0W8 1093 aa21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 KIAA1211Q6ZU35 1233 aa21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 PNMA8AQ86V59 439 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 IFNL3Q8IZI9 196 aa21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 GPBP1L1Q9HC44 474 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 DCP1AQ9NPI6 582 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 CLEC11AQ9Y240 323 aa21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 SIPA1L1O43166 1804 aa21.52■■□□□ 1.04
TRAPPC4-203ENST00000447216 ATP8A2Q9NTI2 1148 aa21.51■■□□□ 1.03
TRAPPC4-203ENST00000447216 MKRN1Q9UHC7 482 aaKnown RBP21.51■■□□□ 1.03
TRAPPC4-203ENST00000447216 TDO2P48775 406 aa21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 FKBP1CQ5VVH2 108 aa21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 APOBEC3FQ8IUX4 373 aaKnown RBP21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 DCPSQ96C86 337 aaKnown RBP21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 DSCC1Q9BVC3 393 aa21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 TMEM39BQ9GZU3 492 aa21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 OSBPL5Q9H0X9 879 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 MCM9Q9NXL9 1143 aa21.5■■□□□ 1.03
TRAPPC4-203ENST00000447216 RPAP1Q9BWH6 1393 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 MYH8P13535 1937 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 CYP2D7A0A087X1C5 515 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 ENTPD3O75355 529 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 CYP2D6P10635 497 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 EVX2Q03828 476 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 RASA3Q14644 834 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 NACAP1Q9BZK3 213 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 NAPBQ9H115 298 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 PGAP2Q9UHJ9 254 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 PALD1Q9ULE6 856 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 PITPNM2Q9BZ72 1349 aa21.49■■□□□ 1.03
TRAPPC4-203ENST00000447216 ADM5C9JUS6 153 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 SMIM22K7EJ46 135 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 NPM3O75607 178 aaKnown RBP21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 REC8O95072 547 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 FGAP02671 866 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 ALX1Q15699 326 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 GIMAP6Q6P9H5 292 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 DLK2Q6UY11 383 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 SH3BP5LQ7L8J4 393 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 ZSCAN29Q8IWY8 852 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 ZC3H15Q8WU90 426 aaKnown RBP21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 FAM151AQ8WW52 585 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 MAP4K1Q92918 833 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 RBM8AQ9Y5S9 174 aaKnown RBP21.48■■□□□ 1.03
TRAPPC4-203ENST00000447216 DDTLA6NHG4 134 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 USP17L12C9JPN9 530 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 USP17L21D6R901 530 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 TNNI2P48788 182 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 TNFAIP1Q13829 316 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 PRAMEF18Q5VWM3 479 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 MAP1SQ66K74 1059 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 CTR9Q6PD62 1173 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 FAM83AQ86UY5 434 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 LDHDQ86WU2 507 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 DEFB129Q9H1M3 183 aa21.47■■□□□ 1.03
TRAPPC4-203ENST00000447216 MINDY4BA8MYZ0 360 aa21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 KRT26Q7Z3Y9 468 aa21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 USP48Q86UV5 1035 aa21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 SULF1Q8IWU6 871 aa21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 GLIS2Q9BZE0 524 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 U3KPZ7 1027 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC4-203ENST00000447216 KIF3CO14782 793 aa21.45■■□□□ 1.02
TRAPPC4-203ENST00000447216 SLURP2P0DP57 97 aa21.45■■□□□ 1.02
TRAPPC4-203ENST00000447216 HAND2P61296 217 aa21.45■■□□□ 1.02
TRAPPC4-203ENST00000447216 STK11IPQ8N1F8 1099 aa21.45■■□□□ 1.02
TRAPPC4-203ENST00000447216 ZNF784Q8NCA9 323 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-203ENST00000447216 COL2A1P02458 1487 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-203ENST00000447216 PLCD1P51178 756 aa21.44■■□□□ 1.02
TRAPPC4-203ENST00000447216 TEPSINQ96N21 525 aa21.44■■□□□ 1.02
TRAPPC4-203ENST00000447216 USP26Q9BXU7 913 aa21.44■■□□□ 1.02
TRAPPC4-203ENST00000447216 ARPP21Q9UBL0 812 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC4-203ENST00000447216 ZMYM6O95789 1325 aa21.44■■□□□ 1.02
TRAPPC4-203ENST00000447216 CTDSPL2Q05D32 466 aa21.43■■□□□ 1.02
TRAPPC4-203ENST00000447216 SBK1Q52WX2 424 aa21.43■■□□□ 1.02
TRAPPC4-203ENST00000447216 NBPF12Q5TAG4 269 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC4-203ENST00000447216 C12orf60Q5U649 245 aa21.43■■□□□ 1.02
TRAPPC4-203ENST00000447216 CTNNA3Q9UI47 895 aa21.43■■□□□ 1.02
TRAPPC4-203ENST00000447216 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
TRAPPC4-203ENST00000447216 PPARAQ07869 468 aa21.42■■□□□ 1.02
TRAPPC4-203ENST00000447216 AMOTL1Q8IY63 956 aa21.42■■□□□ 1.02
TRAPPC4-203ENST00000447216 DYNLL2Q96FJ2 89 aa21.42■■□□□ 1.02
TRAPPC4-203ENST00000447216 TRPM7Q96QT4 1865 aa21.42■■□□□ 1.02
TRAPPC4-203ENST00000447216 CSRNP1Q96S65 589 aa21.42■■□□□ 1.02
TRAPPC4-203ENST00000447216 TAF6LQ9Y6J9 622 aa21.42■■□□□ 1.02
TRAPPC4-203ENST00000447216 FAM196BA6NMK8 535 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 TRAF5O00463 557 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 SLC27A2O14975 620 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 HLA-DOAP06340 250 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 FMR1Q06787 632 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 NECTIN1Q15223 517 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 CREB3L3Q68CJ9 461 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 CHADLQ6NUI6 762 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 CDC37L1Q7L3B6 337 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 TTC6Q86TZ1 520 aa21.41■■□□□ 1.02
TRAPPC4-203ENST00000447216 NBPF3Q9H094 633 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms