RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 GATAD2BQ8WXI9 593 aa7.15□□□□□ -1.26
HMGB1P48-201ENST00000446155 GFRA2O00451 464 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 SLFN14P0C7P3 912 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 NTF4P34130 210 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 GATA4P43694 442 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 ERVK-24P63145 666 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 HNRNPUQ00839 825 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 ID3Q02535 119 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 INPP5AQ14642 412 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 UVSSAQ2YD98 709 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 FAM196AQ6ZSG2 479 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 CYFIP1Q7L576 1253 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 ZNF654Q8IZM8 581 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 DISC1Q9NRI5 854 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 RAD18Q9NS91 495 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 PCDHA4Q9UN74 947 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 ACTL7BQ9Y614 415 aa7.14□□□□□ -1.27
HMGB1P48-201ENST00000446155 ROBO2Q9HCK4 1378 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 ERCC5P28715 1186 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 CRKP46108 304 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 RPL6Q02878 288 aaKnown RBP7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 SNAP47Q5SQN1 464 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 GOLM1Q8NBJ4 401 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 PLPPR2Q96GM1 343 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 ACSBG1Q96GR2 724 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 EAF1Q96JC9 268 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 FANCD2OSQ96PS1 177 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 NT5C1AQ9BXI3 368 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 SNCAIPQ9Y6H5 919 aa7.13□□□□□ -1.27
HMGB1P48-201ENST00000446155 GJA8P48165 433 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 WIPI1Q5MNZ9 446 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 KIAA0825Q8IV33 1275 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 FBXO27Q8NI29 283 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 MYRFLQ96LU7 910 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 SPON2Q9BUD6 331 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 AP4E1Q9UPM8 1137 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 TACC3Q9Y6A5 838 aa7.12□□□□□ -1.27
HMGB1P48-201ENST00000446155 LOC105371045A0A1W2PR82 267 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 DCDC2CA8MYV0 355 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 IGSF3O75054 1194 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 NEFMP07197 916 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 LMNB1P20700 586 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 MPP2Q14168 576 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 EZH1Q92800 747 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 JARID2Q92833 1246 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 SPOCK3Q9BQ16 436 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 ATXN3LQ9H3M9 355 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 ACBD3Q9H3P7 528 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 ACSS3Q9H6R3 686 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 FAM105AQ9NUU6 356 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 HIF3AQ9Y2N7 669 aa7.11□□□□□ -1.27
HMGB1P48-201ENST00000446155 PAK2Q13177 524 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 PPM1JQ5JR12 505 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 ZBTB37Q5TC79 503 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 CDPF1Q6NVV7 123 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 DYMQ7RTS9 669 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 HDXQ7Z353 690 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 C12orf40Q86WS4 652 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 SLITRK4Q8IW52 837 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 FAM20CQ8IXL6 584 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 RNF214Q8ND24 703 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 RASGRP4Q8TDF6 673 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 UTP4Q969X6 686 aaKnown RBP7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P48-201ENST00000446155 PRR36Q9H6K5 1346 aa7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 SART1O43290 800 aaKnown RBP7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 TNNI2P48788 182 aa7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 SGO2Q562F6 1265 aa7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 TINF2Q9BSI4 451 aa7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 CCSER2Q9H7U1 834 aa7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 CSADQ9Y600 493 aa7.09□□□□□ -1.27
HMGB1P48-201ENST00000446155 FANCGO15287 622 aa7.08□□□□□ -1.28
HMGB1P48-201ENST00000446155 TLR3O15455 904 aaKnown RBP7.08□□□□□ -1.28
HMGB1P48-201ENST00000446155 GAS2O43903 313 aaKnown RBP7.08□□□□□ -1.28
HMGB1P48-201ENST00000446155 ASPAP45381 313 aa7.08□□□□□ -1.28
HMGB1P48-201ENST00000446155 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
HMGB1P48-201ENST00000446155 ELMO3Q96BJ8 720 aa7.08□□□□□ -1.28
HMGB1P48-201ENST00000446155 MSTNO14793 375 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 BMP3P12645 472 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 APOBRQ0VD83 1088 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 NKAPLQ5M9Q1 402 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 SEZ6L2Q6UXD5 910 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 UBE3DQ7Z6J8 389 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 FBLIM1Q8WUP2 373 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 ISL2Q96A47 359 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 TP53INP1Q96A56 240 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 SEMA6CQ9H3T2 930 aa7.07□□□□□ -1.28
HMGB1P48-201ENST00000446155 DHX15O43143 795 aaKnown RBP7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 BPNT1O95861 308 aa7.06□□□□□ -1.28
HMGB1P48-201ENST00000446155 IGHA1P01876 353 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms