RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 GSDMBQ8TAX9 411 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 HAUS7Q99871 368 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 ADGRL2O95490 1459 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 CCDC114Q96M63 670 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 SYNMO15061 1565 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 EYA2O00167 538 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 SH3BP5O60239 455 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 TUBBP07437 444 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 MAATS1Q7Z4T9 603 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 ABCA8O94911 1581 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 ESPNB1AK53 854 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 CCT6AP40227 531 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 RNF34Q969K3 372 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 KDM3AQ9Y4C1 1321 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 ELP1O95163 1332 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 H0YCG3 227 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 KRT5P13647 590 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
FN1-212ENST00000446046 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
FN1-212ENST00000446046 GIPC1O14908 333 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 RXRBP28702 533 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 BIRC3Q13489 604 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 AFAP1L2Q8N4X5 818 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 CCDC169A6NNP5 214 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.313e-21■■■■■ 48.7
FN1-212ENST00000446046 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
FN1-212ENST00000446046 DAPK3O43293 454 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 MBD4O95243 580 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 TRIM14Q14142 442 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
FN1-212ENST00000446046 ATP5DP30049 168 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 ABCD1P33897 745 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 CCT6BQ92526 530 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 FAM89AQ96GI7 184 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 ZNF830Q96NB3 372 aaPredicted RBP13.12□□□□□ -0.31
FN1-212ENST00000446046 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
FN1-212ENST00000446046 SP4Q02446 784 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
FN1-212ENST00000446046 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 TMOD1P28289 359 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
FN1-212ENST00000446046 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 E7EVH7 732 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 BCRP11274 1271 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 CCNA1P78396 465 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 UBXN1Q04323 297 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 ELMSAN1Q6PJG2 1045 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
FN1-212ENST00000446046 CALCRLQ16602 461 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
FN1-212ENST00000446046 DCAF17Q5H9S7 520 aaPredicted RBP13.11□□□□□ -0.31
FN1-212ENST00000446046 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
FN1-212ENST00000446046 ZWINTO95229 277 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 SEL1L2Q5TEA6 688 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 CCDC63Q8NA47 563 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 DHX58Q96C10 678 aa13.11□□□□□ -0.31
FN1-212ENST00000446046 CACYBPQ9HB71 228 aaKnown RBP13.1□□□□□ -0.31
FN1-212ENST00000446046 ADCY5O95622 1261 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 INF2Q27J81 1249 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 CNGA4Q8IV77 575 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 HELBQ8NG08 1087 aaPredicted RBP13.1□□□□□ -0.31
FN1-212ENST00000446046 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 AATFQ9NY61 560 aaKnown RBP eCLIP13.1□□□□□ -0.312e-10■■■■■ 89.9
FN1-212ENST00000446046 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 ZMYM4Q5VZL5 1548 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 ZEB2O60315 1214 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 CTSWP56202 376 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 MIS12Q9H081 205 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
FN1-212ENST00000446046 UBL4BQ8N7F7 174 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms