RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 BRI3BPQ8WY22 251 aa23.09■■□□□ 1.29
COMMD1-204ENST00000445644 RAI14Q9P0K7 980 aa23.09■■□□□ 1.29
COMMD1-204ENST00000445644 ATAD5Q96QE3 1844 aa23.09■■□□□ 1.29
COMMD1-204ENST00000445644 DDTLA6NHG4 134 aaPredicted RBP23.08■■□□□ 1.29
COMMD1-204ENST00000445644 ALDH1A1P00352 501 aa23.08■■□□□ 1.29
COMMD1-204ENST00000445644 ZAP70P43403 619 aa23.08■■□□□ 1.29
COMMD1-204ENST00000445644 PTPRFP10586 1907 aa23.08■■□□□ 1.28
COMMD1-204ENST00000445644 PICALMQ13492 652 aa23.07■■□□□ 1.28
COMMD1-204ENST00000445644 CTU1Q7Z7A3 348 aaKnown RBP23.07■■□□□ 1.28
COMMD1-204ENST00000445644 ERO1BQ86YB8 467 aa23.07■■□□□ 1.28
COMMD1-204ENST00000445644 RPAP2Q8IXW5 612 aaPredicted RBP23.07■■□□□ 1.28
COMMD1-204ENST00000445644 PIH1D3Q9NQM4 214 aaKnown RBP23.07■■□□□ 1.28
COMMD1-204ENST00000445644 CRHR2Q13324 411 aa23.06■■□□□ 1.28
COMMD1-204ENST00000445644 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
COMMD1-204ENST00000445644 RHPN1Q8TCX5 695 aa23.06■■□□□ 1.28
COMMD1-204ENST00000445644 LRP2BPQ9P2M1 347 aa23.06■■□□□ 1.28
COMMD1-204ENST00000445644 ZSWIM8A7E2V4 1837 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 HTTP42858 3142 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 CCL15-CCL14A0A0B4J2E2 113 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 PHF20L1A8MW92 1017 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 IRF6O14896 467 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 GSTO1P78417 241 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 MAP3K10Q02779 954 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 CCL15Q16663 113 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 ERC1Q8IUD2 1116 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 NDUFB9Q9Y6M9 179 aa23.05■■□□□ 1.28
COMMD1-204ENST00000445644 COL2A1P02458 1487 aaPredicted RBP23.05■■□□□ 1.28
COMMD1-204ENST00000445644 CCDC85CA6NKD9 419 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 FKTNO75072 461 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 LDHCP07864 332 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 GTF2A2P52657 109 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 PPIL2Q13356 520 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 PDE3AQ14432 1141 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 NOL9Q5SY16 702 aaKnown RBP23.04■■□□□ 1.28
COMMD1-204ENST00000445644 AACSQ86V21 672 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 FAM43AQ8N2R8 423 aa23.04■■□□□ 1.28
COMMD1-204ENST00000445644 SH3RF3Q8TEJ3 882 aaPredicted RBP23.03■■□□□ 1.28
COMMD1-204ENST00000445644 NPM3O75607 178 aaKnown RBP23.02■■□□□ 1.28
COMMD1-204ENST00000445644 CAP1Q01518 475 aa23.02■■□□□ 1.28
COMMD1-204ENST00000445644 PPATQ06203 517 aa23.02■■□□□ 1.28
COMMD1-204ENST00000445644 NAA16Q6N069 864 aaPredicted RBP23.02■■□□□ 1.28
COMMD1-204ENST00000445644 ZSCAN29Q8IWY8 852 aaPredicted RBP23.02■■□□□ 1.28
COMMD1-204ENST00000445644 ANTXR1Q9H6X2 564 aa23.02■■□□□ 1.28
COMMD1-204ENST00000445644 APBB1O00213 710 aa23.01■■□□□ 1.27
COMMD1-204ENST00000445644 HSP90AB4PQ58FF6 505 aa23.01■■□□□ 1.27
COMMD1-204ENST00000445644 OTUD7BQ6GQQ9 843 aa23.01■■□□□ 1.27
COMMD1-204ENST00000445644 OSBPL5Q9H0X9 879 aaPredicted RBP23.01■■□□□ 1.27
COMMD1-204ENST00000445644 AATFQ9NY61 560 aaKnown RBP eCLIP23.01■■□□□ 1.27
COMMD1-204ENST00000445644 MYH1P12882 1939 aa23■■□□□ 1.27
COMMD1-204ENST00000445644 MAP4K4O95819 1239 aaPredicted RBP23■■□□□ 1.27
COMMD1-204ENST00000445644 KCNH4Q9UQ05 1017 aa23■■□□□ 1.27
COMMD1-204ENST00000445644 DDX60LQ5H9U9 1706 aaKnown RBP22.99■■□□□ 1.27
COMMD1-204ENST00000445644 FAM196BA6NMK8 535 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 BTBD19C9JJ37 291 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 HMMRO75330 724 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 CETPP11597 493 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 PPP4CP60510 307 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 SNAPC2Q13487 334 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 MOGSQ13724 837 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 TEX11Q8IYF3 940 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.99■■□□□ 1.27
COMMD1-204ENST00000445644 KIF1BPQ96EK5 621 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 CENPFP49454 3210 aa22.99■■□□□ 1.27
COMMD1-204ENST00000445644 SCYL3Q8IZE3 742 aa22.98■■□□□ 1.27
COMMD1-204ENST00000445644 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.98■■□□□ 1.27
COMMD1-204ENST00000445644 TAF1CQ15572 869 aaPredicted RBP22.97■■□□□ 1.27
COMMD1-204ENST00000445644 CHMP4BQ9H444 224 aaKnown RBP22.97■■□□□ 1.27
COMMD1-204ENST00000445644 HPS5Q9UPZ3 1129 aa22.97■■□□□ 1.27
COMMD1-204ENST00000445644 MYH7P12883 1935 aa22.96■■□□□ 1.27
COMMD1-204ENST00000445644 TBC1D12O60347 775 aa22.96■■□□□ 1.27
COMMD1-204ENST00000445644 DYNLL1P63167 89 aaKnown RBP22.96■■□□□ 1.27
COMMD1-204ENST00000445644 CLASRPQ8N2M8 674 aaKnown RBP22.96■■□□□ 1.27
COMMD1-204ENST00000445644 CD99L2Q8TCZ2 262 aa22.96■■□□□ 1.27
COMMD1-204ENST00000445644 LOC285556D6RIA3 1793 aa22.96■■□□□ 1.27
COMMD1-204ENST00000445644 IGSF3O75054 1194 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 RAB11FIP3O75154 756 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 IDH1O75874 414 aaKnown RBP22.95■■□□□ 1.26
COMMD1-204ENST00000445644 FLT1P17948 1338 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 PTPRAP18433 802 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 CYP7A1P22680 504 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 RRP1BQ14684 758 aaKnown RBP22.95■■□□□ 1.26
COMMD1-204ENST00000445644 PKN2Q16513 984 aaKnown RBP22.95■■□□□ 1.26
COMMD1-204ENST00000445644 OTOP1Q7RTM1 612 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 NAV1Q8NEY1 1877 aa22.95■■□□□ 1.26
COMMD1-204ENST00000445644 BAG3O95817 575 aa22.94■■□□□ 1.26
COMMD1-204ENST00000445644 SP3Q02447 781 aa22.94■■□□□ 1.26
COMMD1-204ENST00000445644 CCDC84Q86UT8 332 aaPredicted RBP22.94■■□□□ 1.26
COMMD1-204ENST00000445644 MAGEB6Q8N7X4 407 aa22.94■■□□□ 1.26
COMMD1-204ENST00000445644 TGFBRAP1Q8WUH2 860 aa22.94■■□□□ 1.26
COMMD1-204ENST00000445644 NOL10Q9BSC4 688 aaKnown RBP22.94■■□□□ 1.26
COMMD1-204ENST00000445644 ZFYVE28Q9HCC9 887 aa22.94■■□□□ 1.26
COMMD1-204ENST00000445644 ZCCHC17Q9NP64 241 aaKnown RBP22.94■■□□□ 1.26
COMMD1-204ENST00000445644 CTNND1O60716 968 aaKnown RBP22.93■■□□□ 1.26
COMMD1-204ENST00000445644 RGS19P49795 217 aa22.93■■□□□ 1.26
COMMD1-204ENST00000445644 FBXO46Q6PJ61 603 aaPredicted RBP22.93■■□□□ 1.26
COMMD1-204ENST00000445644 MAPKAPK5Q8IW41 473 aa22.93■■□□□ 1.26
COMMD1-204ENST00000445644 MIGA1Q8NAN2 632 aa22.93■■□□□ 1.26
COMMD1-204ENST00000445644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.93■■□□□ 1.26
COMMD1-204ENST00000445644 AFG3L2Q9Y4W6 797 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms