RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 CLASRPQ8N2M8 674 aaKnown RBP27.26■■□□□ 1.95
LMBR1-211ENST00000444719 MAST2Q6P0Q8 1798 aa27.26■■□□□ 1.95
LMBR1-211ENST00000444719 RFX7Q2KHR2 1363 aa27.25■■□□□ 1.95
LMBR1-211ENST00000444719 IGF2BP3O00425 579 aaKnown RBP eCLIP27.25■■□□□ 1.95
LMBR1-211ENST00000444719 SH3BP5LQ7L8J4 393 aa27.25■■□□□ 1.95
LMBR1-211ENST00000444719 R3HDMLQ9H3Y0 253 aa27.25■■□□□ 1.95
LMBR1-211ENST00000444719 DDTLA6NHG4 134 aaPredicted RBP27.24■■□□□ 1.95
LMBR1-211ENST00000444719 RAB11FIP3O75154 756 aa27.24■■□□□ 1.95
LMBR1-211ENST00000444719 NOL10Q9BSC4 688 aaKnown RBP27.24■■□□□ 1.95
LMBR1-211ENST00000444719 IFIT2P09913 472 aaKnown RBP27.23■■□□□ 1.95
LMBR1-211ENST00000444719 SLURP2P0DP57 97 aa27.23■■□□□ 1.95
LMBR1-211ENST00000444719 DGKZQ13574 1117 aa27.23■■□□□ 1.95
LMBR1-211ENST00000444719 SPDYE5A6NIY4 337 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 IDH1O75874 414 aaKnown RBP27.22■■□□□ 1.95
LMBR1-211ENST00000444719 ADGRA1Q86SQ6 560 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 ERO1BQ86YB8 467 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 TEX11Q8IYF3 940 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 SH3RF3Q8TEJ3 882 aaPredicted RBP27.22■■□□□ 1.95
LMBR1-211ENST00000444719 PTPN18Q99952 460 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 ANTXR1Q9H6X2 564 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 AATFQ9NY61 560 aaKnown RBP eCLIP27.22■■□□□ 1.95
LMBR1-211ENST00000444719 ZNF112Q9UJU3 913 aa27.22■■□□□ 1.95
LMBR1-211ENST00000444719 CDK5RAP2Q96SN8 1893 aa27.21■■□□□ 1.95
LMBR1-211ENST00000444719 ALDH1A1P00352 501 aa27.21■■□□□ 1.95
LMBR1-211ENST00000444719 RRP1P56182 461 aaKnown RBP27.21■■□□□ 1.95
LMBR1-211ENST00000444719 ABHD8Q96I13 439 aa27.21■■□□□ 1.95
LMBR1-211ENST00000444719 MS4A4AQ96JQ5 239 aa27.21■■□□□ 1.95
LMBR1-211ENST00000444719 MCOLN1Q9GZU1 580 aa27.21■■□□□ 1.95
LMBR1-211ENST00000444719 GPR25O00155 361 aa27.2■■□□□ 1.94
LMBR1-211ENST00000444719 ZNF296Q8WUU4 475 aaPredicted RBP27.2■■□□□ 1.94
LMBR1-211ENST00000444719 CCL15-CCL14A0A0B4J2E2 113 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 TESPA1A2RU30 521 aaPredicted RBP27.19■■□□□ 1.94
LMBR1-211ENST00000444719 BAG3O95817 575 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 CYP7A1P22680 504 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 GTF2A2P52657 109 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 CCL15Q16663 113 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 OTUD7BQ6GQQ9 843 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 ATRNL1Q5VV63 1379 aa27.19■■□□□ 1.94
LMBR1-211ENST00000444719 SMARCA5O60264 1052 aaPredicted RBP27.18■■□□□ 1.94
LMBR1-211ENST00000444719 MAP4K4O95819 1239 aaPredicted RBP27.18■■□□□ 1.94
LMBR1-211ENST00000444719 BRI3BPQ8WY22 251 aa27.18■■□□□ 1.94
LMBR1-211ENST00000444719 IRF6O14896 467 aa27.17■■□□□ 1.94
LMBR1-211ENST00000444719 MAGEB6Q8N7X4 407 aa27.17■■□□□ 1.94
LMBR1-211ENST00000444719 CFHR5Q9BXR6 569 aa27.17■■□□□ 1.94
LMBR1-211ENST00000444719 OSBPL5Q9H0X9 879 aaPredicted RBP27.17■■□□□ 1.94
LMBR1-211ENST00000444719 PHF20L1A8MW92 1017 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 NPM3O75607 178 aaKnown RBP27.16■■□□□ 1.94
LMBR1-211ENST00000444719 PLCG2P16885 1265 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 PPP4CP60510 307 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 DYNLL1P63167 89 aaKnown RBP27.16■■□□□ 1.94
LMBR1-211ENST00000444719 PPIL2Q13356 520 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 TGFBRAP1Q8WUH2 860 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 LRRCC1Q9C099 1032 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 FOCADQ5VW36 1801 aa27.16■■□□□ 1.94
LMBR1-211ENST00000444719 FAM196BA6NMK8 535 aa27.15■■□□□ 1.94
LMBR1-211ENST00000444719 PPATQ06203 517 aa27.15■■□□□ 1.94
LMBR1-211ENST00000444719 MAP3K12Q12852 859 aa27.15■■□□□ 1.94
LMBR1-211ENST00000444719 MIGA1Q8NAN2 632 aa27.15■■□□□ 1.94
LMBR1-211ENST00000444719 DNAJC2Q99543 621 aaKnown RBP27.15■■□□□ 1.94
LMBR1-211ENST00000444719 MAP3K10Q02779 954 aa27.14■■□□□ 1.94
LMBR1-211ENST00000444719 CRHR2Q13324 411 aa27.14■■□□□ 1.94
LMBR1-211ENST00000444719 SNAPC2Q13487 334 aa27.14■■□□□ 1.94
LMBR1-211ENST00000444719 NOL9Q5SY16 702 aaKnown RBP27.14■■□□□ 1.94
LMBR1-211ENST00000444719 MAPKAPK5Q8IW41 473 aa27.14■■□□□ 1.94
LMBR1-211ENST00000444719 GOLIM4O00461 696 aa27.13■■□□□ 1.93
LMBR1-211ENST00000444719 FKTNO75072 461 aa27.13■■□□□ 1.93
LMBR1-211ENST00000444719 CETPP11597 493 aa27.13■■□□□ 1.93
LMBR1-211ENST00000444719 CTU1Q7Z7A3 348 aaKnown RBP27.13■■□□□ 1.93
LMBR1-211ENST00000444719 BOLA2Q9H3K6 86 aa27.13■■□□□ 1.93
LMBR1-211ENST00000444719 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.13■■□□□ 1.939e-7■■□□□ 13
LMBR1-211ENST00000444719 PCDHB15Q9Y5E8 787 aa27.13■■□□□ 1.93
LMBR1-211ENST00000444719 IGSF3O75054 1194 aa27.12■■□□□ 1.93
LMBR1-211ENST00000444719 NOM1Q5C9Z4 860 aaKnown RBP27.12■■□□□ 1.93
LMBR1-211ENST00000444719 FAM43AQ8N2R8 423 aa27.12■■□□□ 1.93
LMBR1-211ENST00000444719 EDC3Q96F86 508 aaKnown RBP27.12■■□□□ 1.93
LMBR1-211ENST00000444719 CRBNQ96SW2 442 aa27.12■■□□□ 1.93
LMBR1-211ENST00000444719 DCTPP1Q9H773 170 aa27.12■■□□□ 1.93
LMBR1-211ENST00000444719 DOCK1Q14185 1865 aa27.12■■□□□ 1.93
LMBR1-211ENST00000444719 CCDC85CA6NKD9 419 aa27.11■■□□□ 1.93
LMBR1-211ENST00000444719 TTF1Q15361 905 aaPredicted RBP27.11■■□□□ 1.93
LMBR1-211ENST00000444719 SCYL3Q8IZE3 742 aa27.11■■□□□ 1.93
LMBR1-211ENST00000444719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.11■■□□□ 1.93
LMBR1-211ENST00000444719 PICK1Q9NRD5 415 aa27.11■■□□□ 1.93
LMBR1-211ENST00000444719 MYH1P12882 1939 aa27.11■■□□□ 1.93
LMBR1-211ENST00000444719 BTBD19C9JJ37 291 aa27.1■■□□□ 1.93
LMBR1-211ENST00000444719 TAF1CQ15572 869 aaPredicted RBP27.1■■□□□ 1.93
LMBR1-211ENST00000444719 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.1■■□□□ 1.93
LMBR1-211ENST00000444719 SAP30BPQ9UHR5 308 aaKnown RBP27.1■■□□□ 1.93
LMBR1-211ENST00000444719 FLT1P17948 1338 aa27.1■■□□□ 1.93
LMBR1-211ENST00000444719 SIPA1L1O43166 1804 aa27.09■■□□□ 1.93
LMBR1-211ENST00000444719 ATAD5Q96QE3 1844 aa27.09■■□□□ 1.93
LMBR1-211ENST00000444719 COL2A1P02458 1487 aaPredicted RBP27.09■■□□□ 1.93
LMBR1-211ENST00000444719 TBC1D12O60347 775 aa27.09■■□□□ 1.93
LMBR1-211ENST00000444719 CTNND1O60716 968 aaKnown RBP27.09■■□□□ 1.93
LMBR1-211ENST00000444719 ZHX2Q9Y6X8 837 aa27.09■■□□□ 1.93
LMBR1-211ENST00000444719 PTPRAP18433 802 aa27.08■■□□□ 1.93
LMBR1-211ENST00000444719 ATP5JP18859 108 aa27.08■■□□□ 1.93
LMBR1-211ENST00000444719 SLC9C2Q5TAH2 1124 aa27.08■■□□□ 1.93
LMBR1-211ENST00000444719 PALD1Q9ULE6 856 aa27.08■■□□□ 1.93
LMBR1-211ENST00000444719 KCNH4Q9UQ05 1017 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms