RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SLC12A7Q9Y666 1083 aa18.33■□□□□ 0.52
SNX13-204ENST00000444712 UFL1O94874 794 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
SNX13-204ENST00000444712 WTAPQ15007 396 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 ZNF384Q8TF68 577 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 LDHCP07864 332 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 PRDX5P30044 214 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 DYNLL1P63167 89 aaKnown RBP18.32■□□□□ 0.52
SNX13-204ENST00000444712 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 RRP12Q5JTH9 1297 aaKnown RBP18.32■□□□□ 0.52
SNX13-204ENST00000444712 TTC6Q86TZ1 520 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
SNX13-204ENST00000444712 C8orf76Q96K31 380 aa18.32■□□□□ 0.52
SNX13-204ENST00000444712 ARPP21Q9UBL0 812 aaPredicted RBP18.32■□□□□ 0.52
SNX13-204ENST00000444712 MYH2Q9UKX2 1941 aa18.31■□□□□ 0.52
SNX13-204ENST00000444712 SYCE3A1L190 88 aa18.31■□□□□ 0.52
SNX13-204ENST00000444712 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
SNX13-204ENST00000444712 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
SNX13-204ENST00000444712 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
SNX13-204ENST00000444712 NOL10Q9BSC4 688 aaKnown RBP18.31■□□□□ 0.52
SNX13-204ENST00000444712 UBAC1Q9BSL1 405 aa18.31■□□□□ 0.52
SNX13-204ENST00000444712 IL1R1P14778 569 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 PPP2R5BQ15173 497 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 QSER1Q2KHR3 1735 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
SNX13-204ENST00000444712 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 STK36Q9NRP7 1315 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 CCDC196A0A1B0GTZ2 297 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
SNX13-204ENST00000444712 BAG3O95817 575 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 PDE6BP35913 854 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 MICU3Q86XE3 530 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 LEO1Q8WVC0 666 aaPredicted RBP18.3■□□□□ 0.52
SNX13-204ENST00000444712 AATFQ9NY61 560 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX13-204ENST00000444712 PARP3Q9Y6F1 533 aa18.3■□□□□ 0.52
SNX13-204ENST00000444712 FGRP09769 529 aa18.29■□□□□ 0.52
SNX13-204ENST00000444712 NPR1P16066 1061 aa18.29■□□□□ 0.52
SNX13-204ENST00000444712 NASPP49321 788 aaPredicted RBP18.29■□□□□ 0.52
SNX13-204ENST00000444712 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
SNX13-204ENST00000444712 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
SNX13-204ENST00000444712 WASF1Q92558 559 aa18.29■□□□□ 0.52
SNX13-204ENST00000444712 CD209Q9NNX6 404 aa18.29■□□□□ 0.52
SNX13-204ENST00000444712 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 FAM173BQ6P4H8 233 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 SLF2Q8IX21 1173 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
SNX13-204ENST00000444712 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 TSPY26PQ9H489 355 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 DCP1AQ9NPI6 582 aaPredicted RBP18.28■□□□□ 0.52
SNX13-204ENST00000444712 INCENPQ9NQS7 918 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 TACC3Q9Y6A5 838 aa18.28■□□□□ 0.52
SNX13-204ENST00000444712 ORC4O43929 436 aa18.27■□□□□ 0.52
SNX13-204ENST00000444712 AMOTL1Q8IY63 956 aa18.27■□□□□ 0.52
SNX13-204ENST00000444712 TBC1D16Q8TBP0 767 aa18.27■□□□□ 0.52
SNX13-204ENST00000444712 TMX4Q9H1E5 349 aaPredicted RBP18.27■□□□□ 0.52
SNX13-204ENST00000444712 ATP6V0A2Q9Y487 856 aa18.27■□□□□ 0.52
SNX13-204ENST00000444712 COL11A2P13942 1736 aaPredicted RBP18.27■□□□□ 0.52
SNX13-204ENST00000444712 MYH6P13533 1939 aa18.27■□□□□ 0.52
SNX13-204ENST00000444712 PPP4CP60510 307 aa18.27■□□□□ 0.51
SNX13-204ENST00000444712 NKX2-3Q8TAU0 364 aa18.27■□□□□ 0.51
SNX13-204ENST00000444712 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.51
SNX13-204ENST00000444712 CDK5RAP2Q96SN8 1893 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 USP17L12C9JPN9 530 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 USP17L21D6R901 530 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 ADD1P35611 737 aaKnown RBP18.26■□□□□ 0.51
SNX13-204ENST00000444712 FOSBP53539 338 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 PDE4BQ07343 736 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
SNX13-204ENST00000444712 RTN1Q16799 776 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 RAB11FIP4Q86YS3 637 aa18.26■□□□□ 0.51
SNX13-204ENST00000444712 MROH7-TTC4A0A0A0MT08 1334 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 TNKSO95271 1327 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 SRGNP10124 158 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 IFNAR1P17181 557 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 CDC27P30260 824 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 TRIM29Q14134 588 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 NTRK3Q16288 839 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 TRIM22Q8IYM9 498 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 ALG1Q9BT22 464 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 RCOR1Q9UKL0 485 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 CALM1P0DP23 149 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 CALM2P0DP24 149 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 CALM3P0DP25 149 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 PLCG2P16885 1265 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 SEC23AQ15436 765 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
SNX13-204ENST00000444712 SENP2Q9HC62 589 aa18.25■□□□□ 0.51
SNX13-204ENST00000444712 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
SNX13-204ENST00000444712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNX13-204ENST00000444712 FMNL1O95466 1100 aaPredicted RBP18.24■□□□□ 0.51
SNX13-204ENST00000444712 USP5P45974 858 aa18.24■□□□□ 0.51
SNX13-204ENST00000444712 GUCY1B3Q02153 619 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms