RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 WBP1LQ9NX94 342 aa20.35■□□□□ 0.85
SHC1-209ENST00000444664 DDTLA6NHG4 134 aaPredicted RBP20.34■□□□□ 0.85
SHC1-209ENST00000444664 MAP4K4O95819 1239 aaPredicted RBP20.34■□□□□ 0.85
SHC1-209ENST00000444664 PDE6AP16499 860 aa20.34■□□□□ 0.85
SHC1-209ENST00000444664 MAP2K1Q02750 393 aaPredicted RBP20.34■□□□□ 0.85
SHC1-209ENST00000444664 SLC9C2Q5TAH2 1124 aa20.34■□□□□ 0.85
SHC1-209ENST00000444664 ZSCAN29Q8IWY8 852 aaPredicted RBP20.34■□□□□ 0.85
SHC1-209ENST00000444664 ANKRD13AQ8IZ07 590 aa20.34■□□□□ 0.85
SHC1-209ENST00000444664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.34■□□□□ 0.85
SHC1-209ENST00000444664 ATRNL1Q5VV63 1379 aa20.34■□□□□ 0.85
SHC1-209ENST00000444664 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.33■□□□□ 0.85
SHC1-209ENST00000444664 SMC5Q8IY18 1101 aa20.33■□□□□ 0.85
SHC1-209ENST00000444664 HOOK2Q96ED9 719 aa20.33■□□□□ 0.85
SHC1-209ENST00000444664 SLC10A4Q96EP9 437 aa20.33■□□□□ 0.85
SHC1-209ENST00000444664 ZBTB47Q9UFB7 747 aaPredicted RBP20.33■□□□□ 0.85
SHC1-209ENST00000444664 SIPA1L1O43166 1804 aa20.33■□□□□ 0.84
SHC1-209ENST00000444664 MYH1P12882 1939 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 SALL3Q9BXA9 1300 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 ZNF532Q9HCE3 1301 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 FOXN1O15353 648 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 SLURP2P0DP57 97 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 PLCG2P16885 1265 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 SLFNL1Q499Z3 407 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 DCAF15Q66K64 600 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 TGFBRAP1Q8WUH2 860 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 WRNIP1Q96S55 665 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 CSRNP1Q96S65 589 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 ZNF341Q9BYN7 854 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
SHC1-209ENST00000444664 ELP3Q9H9T3 547 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 LAMB1P07942 1786 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 TTC41PQ6P2S7 1318 aa20.32■□□□□ 0.84
SHC1-209ENST00000444664 TCRBV5S4A2TA0A5A2 114 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 UNCXA6NJT0 531 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 NPM3O75607 178 aaKnown RBP20.31■□□□□ 0.84
SHC1-209ENST00000444664 CHGBP05060 677 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 MAP3K9P80192 1104 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 VGLL4Q14135 290 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 SPRYD7Q5W111 196 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 MAPKAPK5Q8IW41 473 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 AIDAQ96BJ3 306 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 WNK4Q96J92 1243 aa20.31■□□□□ 0.84
SHC1-209ENST00000444664 NAV1Q8NEY1 1877 aa20.3■□□□□ 0.84
SHC1-209ENST00000444664 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
SHC1-209ENST00000444664 MX1P20591 662 aa20.3■□□□□ 0.84
SHC1-209ENST00000444664 TMED8Q6PL24 325 aaPredicted RBP20.3■□□□□ 0.84
SHC1-209ENST00000444664 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
SHC1-209ENST00000444664 ZKSCAN4Q969J2 545 aaPredicted RBP20.3■□□□□ 0.84
SHC1-209ENST00000444664 LNPKQ9C0E8 428 aa20.3■□□□□ 0.84
SHC1-209ENST00000444664 FLT1P17948 1338 aa20.3■□□□□ 0.84
SHC1-209ENST00000444664 INPP5BP32019 993 aa20.29■□□□□ 0.84
SHC1-209ENST00000444664 ADD2P35612 726 aa20.29■□□□□ 0.84
SHC1-209ENST00000444664 GJA5P36382 358 aa20.29■□□□□ 0.84
SHC1-209ENST00000444664 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
SHC1-209ENST00000444664 RIOK1Q9BRS2 568 aaKnown RBP20.29■□□□□ 0.84
SHC1-209ENST00000444664 CSADQ9Y600 493 aa20.29■□□□□ 0.84
SHC1-209ENST00000444664 SNCAIPQ9Y6H5 919 aa20.29■□□□□ 0.84
SHC1-209ENST00000444664 MAGEB6P1A0A0J9YX57 407 aa20.28■□□□□ 0.84
SHC1-209ENST00000444664 BEGAINQ9BUH8 593 aa20.28■□□□□ 0.84
SHC1-209ENST00000444664 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.843e-7■■■■■ 42.3
SHC1-209ENST00000444664 ZNF112Q9UJU3 913 aa20.28■□□□□ 0.84
SHC1-209ENST00000444664 DDX60LQ5H9U9 1706 aaKnown RBP20.28■□□□□ 0.84
SHC1-209ENST00000444664 FAM196BA6NMK8 535 aa20.27■□□□□ 0.84
SHC1-209ENST00000444664 ERC2O15083 957 aa20.27■□□□□ 0.84
SHC1-209ENST00000444664 GLRX3O76003 335 aaKnown RBP20.27■□□□□ 0.84
SHC1-209ENST00000444664 OPTNQ96CV9 577 aa20.27■□□□□ 0.84
SHC1-209ENST00000444664 SAP30BPQ9UHR5 308 aaKnown RBP20.27■□□□□ 0.84
SHC1-209ENST00000444664 TSKSQ9UJT2 592 aa20.27■□□□□ 0.84
SHC1-209ENST00000444664 DOCK1Q14185 1865 aa20.27■□□□□ 0.84
SHC1-209ENST00000444664 USP5P45974 858 aa20.27■□□□□ 0.83
SHC1-209ENST00000444664 CERS3Q8IU89 383 aa20.27■□□□□ 0.83
SHC1-209ENST00000444664 LCORLQ8N3X6 602 aa20.27■□□□□ 0.83
SHC1-209ENST00000444664 KBTBD3Q8NAB2 608 aa20.27■□□□□ 0.83
SHC1-209ENST00000444664 ATAD5Q96QE3 1844 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 PHF20L1A8MW92 1017 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 ZBTB48P10074 688 aaPredicted RBP20.26■□□□□ 0.83
SHC1-209ENST00000444664 HSPA8P11142 646 aaKnown RBP20.26■□□□□ 0.83
SHC1-209ENST00000444664 PDE1AP54750 535 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 MAP3K10Q02779 954 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 NUCB1Q02818 461 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 CHD1LQ86WJ1 897 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 OTUD5Q96G74 571 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 ARMT1Q9H993 441 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 STAP2Q9UGK3 403 aa20.26■□□□□ 0.83
SHC1-209ENST00000444664 BAZ2AQ9UIF9 1905 aaKnown RBP20.25■□□□□ 0.83
SHC1-209ENST00000444664 MBD4O95243 580 aa20.25■□□□□ 0.83
SHC1-209ENST00000444664 CTCFP49711 727 aaPredicted RBP20.25■□□□□ 0.83
SHC1-209ENST00000444664 UBE3CQ15386 1083 aa20.25■□□□□ 0.83
SHC1-209ENST00000444664 SLC4A8Q2Y0W8 1093 aa20.25■□□□□ 0.83
SHC1-209ENST00000444664 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
SHC1-209ENST00000444664 SPDYE5A6NIY4 337 aa20.24■□□□□ 0.83
SHC1-209ENST00000444664 LBX1P52954 281 aa20.24■□□□□ 0.83
SHC1-209ENST00000444664 NOL9Q5SY16 702 aaKnown RBP20.24■□□□□ 0.83
SHC1-209ENST00000444664 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
SHC1-209ENST00000444664 REM2Q8IYK8 340 aaPredicted RBP20.24■□□□□ 0.83
SHC1-209ENST00000444664 DHX36Q9H2U1 1008 aaKnown RBP20.24■□□□□ 0.83
SHC1-209ENST00000444664 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.24■□□□□ 0.83
SHC1-209ENST00000444664 RNF186Q9NXI6 227 aa20.24■□□□□ 0.83
SHC1-209ENST00000444664 PHIPQ8WWQ0 1821 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms