RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 ARPP21Q9UBL0 812 aaPredicted RBP11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 TPCN1Q9ULQ1 816 aa11.23□□□□□ -0.61
SMPD4P1-203ENST00000443839 NEDD4P46934 1319 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 YDJCA8MPS7 323 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 B4E1Z4 1266 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 PRC1O43663 620 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 RRP12Q5JTH9 1297 aaKnown RBP11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 CTR9Q6PD62 1173 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 AMOTL1Q8IY63 956 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 STAG1Q8WVM7 1258 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 KRT23Q9C075 422 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 CHMP5Q9NZZ3 219 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 TIAM2Q8IVF5 1701 aa11.22□□□□□ -0.61
SMPD4P1-203ENST00000443839 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 LARGE1O95461 756 aa11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 ME3Q16798 604 aa11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 INTS4Q96HW7 963 aaKnown RBP11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 INCENPQ9NQS7 918 aa11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.61
SMPD4P1-203ENST00000443839 RAD17O75943 681 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 SLC3A2P08195 630 aaKnown RBP11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 CRKP46108 304 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 HHIPL2Q6UWX4 724 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 JDP2Q8WYK2 163 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZNRF3Q9ULT6 936 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 WDR19Q8NEZ3 1342 aa11.21□□□□□ -0.62
SMPD4P1-203ENST00000443839 KDM4AO75164 1064 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 DDIT3P35638 169 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 RHBDL3P58872 404 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 STK3Q13188 491 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 SLC4A8Q2Y0W8 1093 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 NAP1L2Q9ULW6 460 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 NAV1Q8NEY1 1877 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 COL4A5P29400 1685 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 LAMB1P07942 1786 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 NFKBIEO00221 500 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 ANTXR2P58335 489 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 FLT1P17948 1338 aa11.2□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 PSME4Q14997 1843 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 PSMD14O00487 310 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 CYP2D6P10635 497 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 FBXL16Q8N461 479 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 ESR2Q92731 530 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 USP40Q9NVE5 1235 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 SERPINA10Q9UK55 444 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
SMPD4P1-203ENST00000443839 RANBP6O60518 1105 aaKnown RBP11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 PDE4BQ07343 736 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 PICALMQ13492 652 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 ARFGEF1Q9Y6D6 1849 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 PRDM1O75626 825 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 EVX2Q03828 476 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 TMEM67Q5HYA8 995 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 C12orf60Q5U649 245 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 APOBEC3HQ6NTF7 200 aaKnown RBP11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
SMPD4P1-203ENST00000443839 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms