RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 RHPN1Q8TCX5 695 aa24.99■■□□□ 1.59
UBE2D4-205ENST00000443780 ZNF296Q8WUU4 475 aaPredicted RBP24.99■■□□□ 1.59
UBE2D4-205ENST00000443780 OTUD5Q96G74 571 aa24.99■■□□□ 1.59
UBE2D4-205ENST00000443780 DDX4Q9NQI0 724 aaKnown RBP24.99■■□□□ 1.59
UBE2D4-205ENST00000443780 ZNF112Q9UJU3 913 aa24.99■■□□□ 1.59
UBE2D4-205ENST00000443780 INPP5BP32019 993 aa24.98■■□□□ 1.59
UBE2D4-205ENST00000443780 ZAP70P43403 619 aa24.98■■□□□ 1.59
UBE2D4-205ENST00000443780 OTUD7BQ6GQQ9 843 aa24.98■■□□□ 1.59
UBE2D4-205ENST00000443780 AACSQ86V21 672 aa24.98■■□□□ 1.59
UBE2D4-205ENST00000443780 PTPN18Q99952 460 aa24.98■■□□□ 1.59
UBE2D4-205ENST00000443780 MAP4K4O95819 1239 aaPredicted RBP24.97■■□□□ 1.59
UBE2D4-205ENST00000443780 GTF2A2P52657 109 aa24.97■■□□□ 1.59
UBE2D4-205ENST00000443780 PICALMQ13492 652 aa24.97■■□□□ 1.59
UBE2D4-205ENST00000443780 SH3BP5LQ7L8J4 393 aa24.97■■□□□ 1.59
UBE2D4-205ENST00000443780 IL1RAPL2Q9NP60 686 aa24.97■■□□□ 1.59
UBE2D4-205ENST00000443780 ATRNL1Q5VV63 1379 aa24.96■■□□□ 1.59
UBE2D4-205ENST00000443780 FOCADQ5VW36 1801 aa24.96■■□□□ 1.59
UBE2D4-205ENST00000443780 NPM3O75607 178 aaKnown RBP24.96■■□□□ 1.59
UBE2D4-205ENST00000443780 NAA16Q6N069 864 aaPredicted RBP24.96■■□□□ 1.59
UBE2D4-205ENST00000443780 CTU1Q7Z7A3 348 aaKnown RBP24.96■■□□□ 1.59
UBE2D4-205ENST00000443780 ZSCAN29Q8IWY8 852 aaPredicted RBP24.96■■□□□ 1.59
UBE2D4-205ENST00000443780 CCL15-CCL14A0A0B4J2E2 113 aa24.95■■□□□ 1.58
UBE2D4-205ENST00000443780 DDTLA6NHG4 134 aaPredicted RBP24.95■■□□□ 1.58
UBE2D4-205ENST00000443780 CCL15Q16663 113 aa24.95■■□□□ 1.58
UBE2D4-205ENST00000443780 BRI3BPQ8WY22 251 aa24.95■■□□□ 1.58
UBE2D4-205ENST00000443780 KIF1BPQ96EK5 621 aa24.95■■□□□ 1.58
UBE2D4-205ENST00000443780 APBB1O00213 710 aa24.94■■□□□ 1.58
UBE2D4-205ENST00000443780 IGSF3O75054 1194 aa24.94■■□□□ 1.58
UBE2D4-205ENST00000443780 FKTNO75072 461 aa24.94■■□□□ 1.58
UBE2D4-205ENST00000443780 PPIL2Q13356 520 aa24.94■■□□□ 1.58
UBE2D4-205ENST00000443780 NOL10Q9BSC4 688 aaKnown RBP24.94■■□□□ 1.58
UBE2D4-205ENST00000443780 PIH1D3Q9NQM4 214 aaKnown RBP24.94■■□□□ 1.58
UBE2D4-205ENST00000443780 IRF6O14896 467 aa24.93■■□□□ 1.58
UBE2D4-205ENST00000443780 MAP3K10Q02779 954 aa24.93■■□□□ 1.58
UBE2D4-205ENST00000443780 PPATQ06203 517 aa24.93■■□□□ 1.58
UBE2D4-205ENST00000443780 NOL9Q5SY16 702 aaKnown RBP24.93■■□□□ 1.58
UBE2D4-205ENST00000443780 CLASRPQ8N2M8 674 aaKnown RBP24.93■■□□□ 1.58
UBE2D4-205ENST00000443780 DOCK1Q14185 1865 aa24.92■■□□□ 1.58
UBE2D4-205ENST00000443780 RAB11FIP3O75154 756 aa24.92■■□□□ 1.58
UBE2D4-205ENST00000443780 CRHR2Q13324 411 aa24.92■■□□□ 1.58
UBE2D4-205ENST00000443780 TEX11Q8IYF3 940 aa24.92■■□□□ 1.58
UBE2D4-205ENST00000443780 CCDC85CA6NKD9 419 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 PHF20L1A8MW92 1017 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 BAG3O95817 575 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 CETPP11597 493 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 PPP4CP60510 307 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 SNAPC2Q13487 334 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 ADGRA1Q86SQ6 560 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 SH3RF3Q8TEJ3 882 aaPredicted RBP24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 AATFQ9NY61 560 aaKnown RBP eCLIP24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 NDUFB9Q9Y6M9 179 aa24.91■■□□□ 1.58
UBE2D4-205ENST00000443780 COL2A1P02458 1487 aaPredicted RBP24.9■■□□□ 1.58
UBE2D4-205ENST00000443780 PHIPQ8WWQ0 1821 aa24.9■■□□□ 1.58
UBE2D4-205ENST00000443780 PTPRFP10586 1907 aa24.9■■□□□ 1.58
UBE2D4-205ENST00000443780 ATAD5Q96QE3 1844 aa24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 MYH1P12882 1939 aa24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 IDH1O75874 414 aaKnown RBP24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 SLURP2P0DP57 97 aa24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 PLCG2P16885 1265 aa24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 FAM43AQ8N2R8 423 aa24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 OSBPL5Q9H0X9 879 aaPredicted RBP24.89■■□□□ 1.58
UBE2D4-205ENST00000443780 IFIT2P09913 472 aaKnown RBP24.88■■□□□ 1.57
UBE2D4-205ENST00000443780 ANTXR1Q9H6X2 564 aa24.88■■□□□ 1.57
UBE2D4-205ENST00000443780 SIPA1L1O43166 1804 aa24.88■■□□□ 1.57
UBE2D4-205ENST00000443780 TBC1D12O60347 775 aa24.87■■□□□ 1.57
UBE2D4-205ENST00000443780 CYP7A1P22680 504 aa24.87■■□□□ 1.57
UBE2D4-205ENST00000443780 TAF1CQ15572 869 aaPredicted RBP24.87■■□□□ 1.57
UBE2D4-205ENST00000443780 PKN2Q16513 984 aaKnown RBP24.87■■□□□ 1.57
UBE2D4-205ENST00000443780 SCYL3Q8IZE3 742 aa24.87■■□□□ 1.57
UBE2D4-205ENST00000443780 KCNH4Q9UQ05 1017 aa24.87■■□□□ 1.57
UBE2D4-205ENST00000443780 BTBD19C9JJ37 291 aa24.86■■□□□ 1.57
UBE2D4-205ENST00000443780 BCL11AQ9H165 835 aa24.86■■□□□ 1.57
UBE2D4-205ENST00000443780 ZFYVE28Q9HCC9 887 aa24.86■■□□□ 1.57
UBE2D4-205ENST00000443780 ZCCHC17Q9NP64 241 aaKnown RBP24.86■■□□□ 1.57
UBE2D4-205ENST00000443780 CTNND1O60716 968 aaKnown RBP24.85■■□□□ 1.57
UBE2D4-205ENST00000443780 MAP3K12Q12852 859 aa24.85■■□□□ 1.57
UBE2D4-205ENST00000443780 MAGEB6Q8N7X4 407 aa24.85■■□□□ 1.57
UBE2D4-205ENST00000443780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.85■■□□□ 1.57
UBE2D4-205ENST00000443780 PICK1Q9NRD5 415 aa24.85■■□□□ 1.57
UBE2D4-205ENST00000443780 FAM196BA6NMK8 535 aa24.84■■□□□ 1.57
UBE2D4-205ENST00000443780 DYNLL1P63167 89 aaKnown RBP24.84■■□□□ 1.57
UBE2D4-205ENST00000443780 TGFBRAP1Q8WUH2 860 aa24.84■■□□□ 1.57
UBE2D4-205ENST00000443780 YTHDC1Q96MU7 727 aaKnown RBP24.84■■□□□ 1.57
UBE2D4-205ENST00000443780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.84■■□□□ 1.57
UBE2D4-205ENST00000443780 MYH7P12883 1935 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 CXCL11O14625 94 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 PTPRAP18433 802 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 SP3Q02447 781 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 TTF1Q15361 905 aaPredicted RBP24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 TMED8Q6PL24 325 aaPredicted RBP24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 MAPKAPK5Q8IW41 473 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 ERO1AQ96HE7 468 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 DHX36Q9H2U1 1008 aaKnown RBP24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 ZHX2Q9Y6X8 837 aa24.83■■□□□ 1.57
UBE2D4-205ENST00000443780 MIGA1Q8NAN2 632 aa24.82■■□□□ 1.56
UBE2D4-205ENST00000443780 LRRCC1Q9C099 1032 aa24.82■■□□□ 1.56
UBE2D4-205ENST00000443780 PI4KBQ9UBF8 816 aa24.82■■□□□ 1.56
UBE2D4-205ENST00000443780 FLT1P17948 1338 aa24.82■■□□□ 1.56
UBE2D4-205ENST00000443780 RRP1P56182 461 aaKnown RBP24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 MOGSQ13724 837 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms