RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
VPS50-206ENST00000443443 GP2P55259 537 aaKnown RBP8.27□□□□□ -1.09
VPS50-206ENST00000443443 LRRC14Q15048 493 aa8.27□□□□□ -1.09
VPS50-206ENST00000443443 EAPPQ56P03 285 aaPredicted RBP8.27□□□□□ -1.09
VPS50-206ENST00000443443 GATA6Q92908 595 aa8.27□□□□□ -1.09
VPS50-206ENST00000443443 FRMD6Q96NE9 622 aa8.27□□□□□ -1.09
VPS50-206ENST00000443443 TTF2Q9UNY4 1162 aaKnown RBP8.27□□□□□ -1.09
VPS50-206ENST00000443443 CSADQ9Y600 493 aa8.27□□□□□ -1.09
VPS50-206ENST00000443443 ADAMTS4O75173 837 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 OGFOD3Q6PK18 319 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 SEZ6L2Q6UXD5 910 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 PCOLCE2Q9UKZ9 415 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 ANGEL1Q9UNK9 670 aaKnown RBP8.26□□□□□ -1.09
VPS50-206ENST00000443443 PCDHGC5Q9Y5F6 944 aa8.26□□□□□ -1.09
VPS50-206ENST00000443443 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
VPS50-206ENST00000443443 GNA15P30679 374 aa8.25□□□□□ -1.09
VPS50-206ENST00000443443 FGD1P98174 961 aa8.25□□□□□ -1.09
VPS50-206ENST00000443443 CYP27C1Q4G0S4 372 aa8.25□□□□□ -1.09
VPS50-206ENST00000443443 ZC3H12AQ5D1E8 599 aaKnown RBP8.25□□□□□ -1.09
VPS50-206ENST00000443443 LLGL2Q6P1M3 1020 aa8.25□□□□□ -1.09
VPS50-206ENST00000443443 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS50-206ENST00000443443 DUSP9Q99956 384 aaKnown RBP8.25□□□□□ -1.09
VPS50-206ENST00000443443 OAS3Q9Y6K5 1087 aaKnown RBP8.25□□□□□ -1.09
VPS50-206ENST00000443443 DCDC2CA8MYV0 355 aa8.24□□□□□ -1.09
VPS50-206ENST00000443443 CELA3AP09093 270 aa8.24□□□□□ -1.09
VPS50-206ENST00000443443 C12orf40Q86WS4 652 aa8.24□□□□□ -1.09
VPS50-206ENST00000443443 PCDHA4Q9UN74 947 aa8.24□□□□□ -1.09
VPS50-206ENST00000443443 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
VPS50-206ENST00000443443 TRIM37O94972 964 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 FAM87AP0C7U9 286 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 IRAK1P51617 712 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 ERVK-24P63145 666 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 PPM1JQ5JR12 505 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 PCNX4Q63HM2 1172 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 RNF214Q8ND24 703 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 ISL2Q96A47 359 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 RNF19AQ9NV58 838 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 AK5Q9Y6K8 562 aa8.23□□□□□ -1.09
VPS50-206ENST00000443443 COL19A1Q14993 1142 aa8.22□□□□□ -1.09
VPS50-206ENST00000443443 MSMPQ1L6U9 139 aa8.22□□□□□ -1.09
VPS50-206ENST00000443443 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
VPS50-206ENST00000443443 ZC3H7BQ9UGR2 993 aaKnown RBP8.22□□□□□ -1.09
VPS50-206ENST00000443443 NEFMP07197 916 aa8.21□□□□□ -1.1
VPS50-206ENST00000443443 LMNB1P20700 586 aa8.21□□□□□ -1.1
VPS50-206ENST00000443443 CCDC85BQ15834 202 aaPredicted RBP8.21□□□□□ -1.1
VPS50-206ENST00000443443 RASIP1Q5U651 963 aa8.21□□□□□ -1.1
VPS50-206ENST00000443443 SV2BQ7L1I2 683 aa8.21□□□□□ -1.1
VPS50-206ENST00000443443 ELMO3Q96BJ8 720 aa8.21□□□□□ -1.1
VPS50-206ENST00000443443 GZF1Q9H116 711 aaPredicted RBP8.21□□□□□ -1.1
VPS50-206ENST00000443443 CCDC39Q9UFE4 941 aa8.21□□□□□ -1.1
VPS50-206ENST00000443443 XPCQ01831 940 aaPredicted RBP8.2□□□□□ -1.1
VPS50-206ENST00000443443 ARHGAP27Q6ZUM4 889 aa8.2□□□□□ -1.1
VPS50-206ENST00000443443 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
VPS50-206ENST00000443443 TP53INP2Q8IXH6 220 aa8.2□□□□□ -1.1
VPS50-206ENST00000443443 ANKRD24Q8TF21 1146 aa8.2□□□□□ -1.1
VPS50-206ENST00000443443 PARP2Q9UGN5 583 aa8.2□□□□□ -1.1
VPS50-206ENST00000443443 LEFTY1O75610 366 aa8.19□□□□□ -1.1
VPS50-206ENST00000443443 PSMD2Q13200 908 aa8.19□□□□□ -1.1
VPS50-206ENST00000443443 TTBK2Q6IQ55 1244 aa8.19□□□□□ -1.1
VPS50-206ENST00000443443 CACNA2D2Q9NY47 1150 aa8.19□□□□□ -1.1
VPS50-206ENST00000443443 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
VPS50-206ENST00000443443 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
VPS50-206ENST00000443443 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
VPS50-206ENST00000443443 FAM181AQ8N9Y4 354 aa8.18□□□□□ -1.1
VPS50-206ENST00000443443 DUSP23Q9BVJ7 150 aa8.18□□□□□ -1.1
VPS50-206ENST00000443443 PTPN11Q06124 597 aaPredicted RBP8.17□□□□□ -1.1
VPS50-206ENST00000443443 INPP5AQ14642 412 aa8.17□□□□□ -1.1
VPS50-206ENST00000443443 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
VPS50-206ENST00000443443 MCTP1Q6DN14 999 aa8.17□□□□□ -1.1
VPS50-206ENST00000443443 VSIG10LQ86VR7 867 aa8.17□□□□□ -1.1
VPS50-206ENST00000443443 FLCNQ8NFG4 579 aa8.17□□□□□ -1.1
VPS50-206ENST00000443443 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
VPS50-206ENST00000443443 PRAMEF27A3QJZ7 478 aa8.16□□□□□ -1.1
VPS50-206ENST00000443443 FANCGO15287 622 aa8.16□□□□□ -1.1
VPS50-206ENST00000443443 PRNPP04156 253 aa8.16□□□□□ -1.1
VPS50-206ENST00000443443 DNAJC14Q6Y2X3 702 aaPredicted RBP8.16□□□□□ -1.1
VPS50-206ENST00000443443 HDXQ7Z353 690 aa8.16□□□□□ -1.1
VPS50-206ENST00000443443 NPAS4Q8IUM7 802 aa8.16□□□□□ -1.1
VPS50-206ENST00000443443 FAM161BQ96MY7 647 aa8.16□□□□□ -1.1
VPS50-206ENST00000443443 TAL1P17542 331 aaPredicted RBP8.15□□□□□ -1.1
VPS50-206ENST00000443443 CCDC27Q2M243 656 aa8.15□□□□□ -1.1
VPS50-206ENST00000443443 ZBTB37Q5TC79 503 aa8.15□□□□□ -1.1
VPS50-206ENST00000443443 ABI1Q8IZP0 508 aa8.15□□□□□ -1.1
VPS50-206ENST00000443443 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.1
VPS50-206ENST00000443443 ZNF507Q8TCN5 953 aa8.15□□□□□ -1.1
VPS50-206ENST00000443443 NETO1Q8TDF5 533 aa8.15□□□□□ -1.1
VPS50-206ENST00000443443 SLC5A6Q9Y289 635 aa8.15□□□□□ -1.1
VPS50-206ENST00000443443 COL17A1Q9UMD9 1497 aaPredicted RBP8.14□□□□□ -1.11
VPS50-206ENST00000443443 DAB2P98082 770 aa8.14□□□□□ -1.11
VPS50-206ENST00000443443 RING1Q06587 406 aa8.14□□□□□ -1.11
VPS50-206ENST00000443443 MEI1Q5TIA1 1274 aa8.14□□□□□ -1.11
VPS50-206ENST00000443443 LRFN4Q6PJG9 635 aa8.14□□□□□ -1.11
VPS50-206ENST00000443443 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.14□□□□□ -1.11
VPS50-206ENST00000443443 KCT2Q8NC54 265 aa8.14□□□□□ -1.11
VPS50-206ENST00000443443 PLPPR2Q96GM1 343 aa8.14□□□□□ -1.11
VPS50-206ENST00000443443 ETF1P62495 437 aaKnown RBP8.13□□□□□ -1.11
VPS50-206ENST00000443443 BNIP3Q12983 259 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms