RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 PTPRFP10586 1907 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 IRF6O14896 467 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 MCAMP43121 646 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 TBC1D9Q6ZT07 1266 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 CD99L2Q8TCZ2 262 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 PANK1Q8TE04 598 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 FOCADQ5VW36 1801 aa17.74■□□□□ 0.43
PTPRN-206ENST00000442029 GPR75-ASB3A0A0A6YYF3 556 aa17.73■□□□□ 0.43
PTPRN-206ENST00000442029 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
PTPRN-206ENST00000442029 ZFPM1Q8IX07 1006 aa17.73■□□□□ 0.43
PTPRN-206ENST00000442029 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
PTPRN-206ENST00000442029 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
PTPRN-206ENST00000442029 DBNDD2Q9BQY9 259 aa17.73■□□□□ 0.43
PTPRN-206ENST00000442029 ZNF112Q9UJU3 913 aa17.73■□□□□ 0.43
PTPRN-206ENST00000442029 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
PTPRN-206ENST00000442029 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
PTPRN-206ENST00000442029 MAP4K4O95819 1239 aaPredicted RBP17.72■□□□□ 0.43
PTPRN-206ENST00000442029 NOL9Q5SY16 702 aaKnown RBP17.72■□□□□ 0.43
PTPRN-206ENST00000442029 OTOP1Q7RTM1 612 aa17.72■□□□□ 0.43
PTPRN-206ENST00000442029 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
PTPRN-206ENST00000442029 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
PTPRN-206ENST00000442029 ZCCHC17Q9NP64 241 aaKnown RBP17.72■□□□□ 0.43
PTPRN-206ENST00000442029 SNRKQ9NRH2 765 aa17.72■□□□□ 0.43
PTPRN-206ENST00000442029 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
PTPRN-206ENST00000442029 MYH1P12882 1939 aa17.71■□□□□ 0.43
PTPRN-206ENST00000442029 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
PTPRN-206ENST00000442029 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
PTPRN-206ENST00000442029 PICK1Q9NRD5 415 aa17.71■□□□□ 0.43
PTPRN-206ENST00000442029 MGAMO43451 1857 aa17.7■□□□□ 0.42
PTPRN-206ENST00000442029 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
PTPRN-206ENST00000442029 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
PTPRN-206ENST00000442029 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
PTPRN-206ENST00000442029 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
PTPRN-206ENST00000442029 ZSWIM8A7E2V4 1837 aa17.7■□□□□ 0.42
PTPRN-206ENST00000442029 ATRNL1Q5VV63 1379 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 BAG3O95817 575 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 RHBDL3P58872 404 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 KIF22Q14807 665 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 HSP90AB4PQ58FF6 505 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 TEX11Q8IYF3 940 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 SCYL3Q8IZE3 742 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 CCDC8Q9H0W5 538 aaPredicted RBP17.69■□□□□ 0.42
PTPRN-206ENST00000442029 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
PTPRN-206ENST00000442029 TLR2O60603 784 aa17.68■□□□□ 0.42
PTPRN-206ENST00000442029 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
PTPRN-206ENST00000442029 ZNF512BQ96KM6 892 aaPredicted RBP17.68■□□□□ 0.42
PTPRN-206ENST00000442029 CHMP4BQ9H444 224 aaKnown RBP17.68■□□□□ 0.42
PTPRN-206ENST00000442029 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
PTPRN-206ENST00000442029 KCNH4Q9UQ05 1017 aa17.68■□□□□ 0.42
PTPRN-206ENST00000442029 EXOC6BQ9Y2D4 811 aa17.68■□□□□ 0.42
PTPRN-206ENST00000442029 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
PTPRN-206ENST00000442029 RBBP6Q7Z6E9 1792 aaKnown RBP17.68■□□□□ 0.42
PTPRN-206ENST00000442029 PDE4DIPQ5VU43 2346 aa17.67■□□□□ 0.42
PTPRN-206ENST00000442029 PHF20L1A8MW92 1017 aa17.67■□□□□ 0.42
PTPRN-206ENST00000442029 PLCG2P16885 1265 aa17.67■□□□□ 0.42
PTPRN-206ENST00000442029 ANKRD23Q86SG2 305 aa17.67■□□□□ 0.42
PTPRN-206ENST00000442029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTPRN-206ENST00000442029 AATFQ9NY61 560 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTPRN-206ENST00000442029 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
PTPRN-206ENST00000442029 COL2A1P02458 1487 aaPredicted RBP17.67■□□□□ 0.42
PTPRN-206ENST00000442029 PDHXO00330 501 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 CXCL11O14625 94 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 CTNND1O60716 968 aaKnown RBP17.66■□□□□ 0.42
PTPRN-206ENST00000442029 IGSF3O75054 1194 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 HMMRO75330 724 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 CYP2E1P05181 493 aaPredicted RBP17.66■□□□□ 0.42
PTPRN-206ENST00000442029 ZAP70P43403 619 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 AACSQ86V21 672 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
PTPRN-206ENST00000442029 OSBPL5Q9H0X9 879 aaPredicted RBP17.66■□□□□ 0.42
PTPRN-206ENST00000442029 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
PTPRN-206ENST00000442029 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 ZHX2Q9Y6X8 837 aa17.66■□□□□ 0.42
PTPRN-206ENST00000442029 KIAA0100Q14667 2235 aaKnown RBP17.66■□□□□ 0.42
PTPRN-206ENST00000442029 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
PTPRN-206ENST00000442029 TBC1D12O60347 775 aa17.65■□□□□ 0.42
PTPRN-206ENST00000442029 PTPRAP18433 802 aa17.65■□□□□ 0.42
PTPRN-206ENST00000442029 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
PTPRN-206ENST00000442029 FASTKD5Q7L8L6 764 aaKnown RBP17.65■□□□□ 0.42
PTPRN-206ENST00000442029 RPAP2Q8IXW5 612 aaPredicted RBP17.65■□□□□ 0.42
PTPRN-206ENST00000442029 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
PTPRN-206ENST00000442029 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
PTPRN-206ENST00000442029 PARK7Q99497 189 aaKnown RBP17.64■□□□□ 0.41
PTPRN-206ENST00000442029 MYH7P12883 1935 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 APBB1O00213 710 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 IDH1O75874 414 aaKnown RBP17.63■□□□□ 0.41
PTPRN-206ENST00000442029 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 LACTBP83111 547 aaPredicted RBP17.63■□□□□ 0.41
PTPRN-206ENST00000442029 TRIM34Q9BYJ4 488 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 DHX36Q9H2U1 1008 aaKnown RBP17.63■□□□□ 0.41
PTPRN-206ENST00000442029 IL1RAPL2Q9NP60 686 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 PIH1D3Q9NQM4 214 aaKnown RBP17.63■□□□□ 0.41
PTPRN-206ENST00000442029 CPA4Q9UI42 421 aa17.63■□□□□ 0.41
PTPRN-206ENST00000442029 LOC285556D6RIA3 1793 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 A0A0G2JLL6 359 aaPredicted RBP17.62■□□□□ 0.41
PTPRN-206ENST00000442029 ECM2O94769 699 aaPredicted RBP17.62■□□□□ 0.41
PTPRN-206ENST00000442029 CYP7A1P22680 504 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms