RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 MAP3K10Q02779 954 aa33.29■■■□□ 2.92
MRPL28-204ENST00000441883 OS9Q13438 667 aaPredicted RBP33.29■■■□□ 2.92
MRPL28-204ENST00000441883 TAF1CQ15572 869 aaPredicted RBP33.29■■■□□ 2.92
MRPL28-204ENST00000441883 NOL9Q5SY16 702 aaKnown RBP33.29■■■□□ 2.92
MRPL28-204ENST00000441883 ERO1AQ96HE7 468 aa33.29■■■□□ 2.92
MRPL28-204ENST00000441883 ZFYVE28Q9HCC9 887 aa33.29■■■□□ 2.92
MRPL28-204ENST00000441883 DOCK2Q92608 1830 aa33.28■■■□□ 2.92
MRPL28-204ENST00000441883 DDTLA6NHG4 134 aaPredicted RBP33.28■■■□□ 2.92
MRPL28-204ENST00000441883 PHF20L1A8MW92 1017 aa33.28■■■□□ 2.92
MRPL28-204ENST00000441883 BTBD19C9JJ37 291 aa33.28■■■□□ 2.92
MRPL28-204ENST00000441883 CEP85Q6P2H3 762 aa33.27■■■□□ 2.92
MRPL28-204ENST00000441883 SNRKQ9NRH2 765 aa33.27■■■□□ 2.92
MRPL28-204ENST00000441883 LDHCP07864 332 aa33.26■■■□□ 2.91
MRPL28-204ENST00000441883 SLURP2P0DP57 97 aa33.26■■■□□ 2.91
MRPL28-204ENST00000441883 ZCCHC17Q9NP64 241 aaKnown RBP33.26■■■□□ 2.91
MRPL28-204ENST00000441883 RAI14Q9P0K7 980 aa33.26■■■□□ 2.91
MRPL28-204ENST00000441883 KCNH4Q9UQ05 1017 aa33.26■■■□□ 2.91
MRPL28-204ENST00000441883 GSTO1P78417 241 aa33.25■■■□□ 2.91
MRPL28-204ENST00000441883 PICALMQ13492 652 aa33.25■■■□□ 2.91
MRPL28-204ENST00000441883 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.25■■■□□ 2.91
MRPL28-204ENST00000441883 NPM3O75607 178 aaKnown RBP33.24■■■□□ 2.91
MRPL28-204ENST00000441883 CCDC158Q5M9N0 1113 aa33.24■■■□□ 2.91
MRPL28-204ENST00000441883 TTC39AQ5SRH9 613 aa33.24■■■□□ 2.91
MRPL28-204ENST00000441883 ZSCAN29Q8IWY8 852 aaPredicted RBP33.24■■■□□ 2.91
MRPL28-204ENST00000441883 ZNF512BQ96KM6 892 aaPredicted RBP33.24■■■□□ 2.91
MRPL28-204ENST00000441883 MOGSQ13724 837 aa33.23■■■□□ 2.91
MRPL28-204ENST00000441883 EAF2Q96CJ1 260 aaPredicted RBP33.23■■■□□ 2.91
MRPL28-204ENST00000441883 LRP2BPQ9P2M1 347 aa33.23■■■□□ 2.91
MRPL28-204ENST00000441883 DBNLQ9UJU6 430 aaKnown RBP33.23■■■□□ 2.91
MRPL28-204ENST00000441883 EFCC1Q9HA90 598 aa33.22■■■□□ 2.91
MRPL28-204ENST00000441883 PTPN22Q9Y2R2 807 aa33.22■■■□□ 2.91
MRPL28-204ENST00000441883 HTTP42858 3142 aa33.22■■■□□ 2.91
MRPL28-204ENST00000441883 TLR2O60603 784 aa33.21■■■□□ 2.91
MRPL28-204ENST00000441883 MAP4K4O95819 1239 aaPredicted RBP33.21■■■□□ 2.91
MRPL28-204ENST00000441883 TLR7Q9NYK1 1049 aaKnown RBP33.21■■■□□ 2.91
MRPL28-204ENST00000441883 CYP2E1P05181 493 aaPredicted RBP33.2■■■□□ 2.91
MRPL28-204ENST00000441883 CCDC8Q9H0W5 538 aaPredicted RBP33.2■■■□□ 2.91
MRPL28-204ENST00000441883 MYO5AQ9Y4I1 1855 aaKnown RBP33.2■■■□□ 2.9
MRPL28-204ENST00000441883 SCYL3Q8IZE3 742 aa33.19■■■□□ 2.9
MRPL28-204ENST00000441883 TNRC18O15417 2968 aaPredicted RBP33.18■■■□□ 2.9
MRPL28-204ENST00000441883 ANKRD23Q86SG2 305 aa33.18■■■□□ 2.9
MRPL28-204ENST00000441883 CXCL11O14625 94 aa33.17■■■□□ 2.9
MRPL28-204ENST00000441883 MS4A1P11836 297 aa33.17■■■□□ 2.9
MRPL28-204ENST00000441883 PTPRAP18433 802 aa33.17■■■□□ 2.9
MRPL28-204ENST00000441883 ZAP70P43403 619 aa33.17■■■□□ 2.9
MRPL28-204ENST00000441883 TBC1D12O60347 775 aa33.16■■■□□ 2.9
MRPL28-204ENST00000441883 SH3RF3Q8TEJ3 882 aaPredicted RBP33.16■■■□□ 2.9
MRPL28-204ENST00000441883 EXOC6BQ9Y2D4 811 aa33.16■■■□□ 2.9
MRPL28-204ENST00000441883 ZHX2Q9Y6X8 837 aa33.16■■■□□ 2.9
MRPL28-204ENST00000441883 PDHXO00330 501 aa33.15■■■□□ 2.9
MRPL28-204ENST00000441883 CTNND1O60716 968 aaKnown RBP33.15■■■□□ 2.9
MRPL28-204ENST00000441883 NAA16Q6N069 864 aaPredicted RBP33.15■■■□□ 2.9
MRPL28-204ENST00000441883 OSBPL5Q9H0X9 879 aaPredicted RBP33.15■■■□□ 2.9
MRPL28-204ENST00000441883 PIH1D3Q9NQM4 214 aaKnown RBP33.15■■■□□ 2.9
MRPL28-204ENST00000441883 PICK1Q9NRD5 415 aa33.15■■■□□ 2.9
MRPL28-204ENST00000441883 COL2A1P02458 1487 aaPredicted RBP33.14■■■□□ 2.9
MRPL28-204ENST00000441883 PPP4CP60510 307 aa33.14■■■□□ 2.9
MRPL28-204ENST00000441883 GPAT2Q6NUI2 795 aa33.14■■■□□ 2.9
MRPL28-204ENST00000441883 C17orf99Q6UX52 265 aa33.14■■■□□ 2.9
MRPL28-204ENST00000441883 ADGRA1Q86SQ6 560 aa33.14■■■□□ 2.9
MRPL28-204ENST00000441883 TEX11Q8IYF3 940 aa33.14■■■□□ 2.9
MRPL28-204ENST00000441883 AFG3L2Q9Y4W6 797 aa33.14■■■□□ 2.9
MRPL28-204ENST00000441883 COG6Q9Y2V7 657 aa33.13■■■□□ 2.89
MRPL28-204ENST00000441883 PHIPQ8WWQ0 1821 aa33.13■■■□□ 2.89
MRPL28-204ENST00000441883 MAST2Q6P0Q8 1798 aa33.13■■■□□ 2.89
MRPL28-204ENST00000441883 PDE4DIPQ5VU43 2346 aa33.13■■■□□ 2.89
MRPL28-204ENST00000441883 DOCK1Q14185 1865 aa33.12■■■□□ 2.89
MRPL28-204ENST00000441883 ZSWIM8A7E2V4 1837 aa33.12■■■□□ 2.89
MRPL28-204ENST00000441883 ADGRA2Q96PE1 1338 aa33.12■■■□□ 2.89
MRPL28-204ENST00000441883 FAM196BA6NMK8 535 aa33.12■■■□□ 2.89
MRPL28-204ENST00000441883 ARHGAP39Q9C0H5 1083 aa33.12■■■□□ 2.89
MRPL28-204ENST00000441883 ZBTB40Q9NUA8 1239 aa33.12■■■□□ 2.89
MRPL28-204ENST00000441883 AATFQ9NY61 560 aaKnown RBP eCLIP33.12■■■□□ 2.89
MRPL28-204ENST00000441883 LACTBP83111 547 aaPredicted RBP33.11■■■□□ 2.89
MRPL28-204ENST00000441883 ARHGEF6Q15052 776 aa33.11■■■□□ 2.89
MRPL28-204ENST00000441883 ERC1Q8IUD2 1116 aa33.11■■■□□ 2.89
MRPL28-204ENST00000441883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.11■■■□□ 2.89
MRPL28-204ENST00000441883 RCAN3Q9UKA8 241 aa33.11■■■□□ 2.89
MRPL28-204ENST00000441883 A0A0G2JLL6 359 aaPredicted RBP33.1■■■□□ 2.89
MRPL28-204ENST00000441883 IGSF3O75054 1194 aa33.1■■■□□ 2.89
MRPL28-204ENST00000441883 BAG3O95817 575 aa33.1■■■□□ 2.89
MRPL28-204ENST00000441883 PRRT2Q7Z6L0 340 aaPredicted RBP33.1■■■□□ 2.89
MRPL28-204ENST00000441883 SIRT2Q8IXJ6 389 aa33.1■■■□□ 2.89
MRPL28-204ENST00000441883 ARMC5Q96C12 935 aa33.1■■■□□ 2.89
MRPL28-204ENST00000441883 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.1■■■□□ 2.89
MRPL28-204ENST00000441883 CPA4Q9UI42 421 aa33.1■■■□□ 2.89
MRPL28-204ENST00000441883 PTPRFP10586 1907 aa33.09■■■□□ 2.89
MRPL28-204ENST00000441883 RPAP2Q8IXW5 612 aaPredicted RBP33.09■■■□□ 2.89
MRPL28-204ENST00000441883 NOL10Q9BSC4 688 aaKnown RBP33.09■■■□□ 2.89
MRPL28-204ENST00000441883 DDX19BQ9UMR2 479 aa33.09■■■□□ 2.89
MRPL28-204ENST00000441883 CDK5RAP2Q96SN8 1893 aa33.09■■■□□ 2.89
MRPL28-204ENST00000441883 CENPFP49454 3210 aa33.09■■■□□ 2.89
MRPL28-204ENST00000441883 RRP1BQ14684 758 aaKnown RBP33.08■■■□□ 2.89
MRPL28-204ENST00000441883 CCDC84Q86UT8 332 aaPredicted RBP33.08■■■□□ 2.89
MRPL28-204ENST00000441883 AACSQ86V21 672 aa33.08■■■□□ 2.89
MRPL28-204ENST00000441883 RHPN1Q8TCX5 695 aa33.08■■■□□ 2.89
MRPL28-204ENST00000441883 KIAA0100Q14667 2235 aaKnown RBP33.08■■■□□ 2.89
MRPL28-204ENST00000441883 PLCG2P16885 1265 aa33.07■■■□□ 2.88
MRPL28-204ENST00000441883 IL1RAPL2Q9NP60 686 aa33.07■■■□□ 2.88
MRPL28-204ENST00000441883 PTCH2Q9Y6C5 1203 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms