RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
SYN3-204ENST00000441821 SCYL3Q8IZE3 742 aa12.57□□□□□ -0.4
SYN3-204ENST00000441821 FAM198AQ9UFP1 575 aa12.57□□□□□ -0.4
SYN3-204ENST00000441821 AFG3L2Q9Y4W6 797 aa12.57□□□□□ -0.4
SYN3-204ENST00000441821 UTYO14607 1347 aa12.57□□□□□ -0.4
SYN3-204ENST00000441821 ALPK3Q96L96 1907 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
SYN3-204ENST00000441821 PTPRAP18433 802 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 FGFR2P21802 821 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
SYN3-204ENST00000441821 Q7L0L9 218 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 SMCR8Q8TEV9 937 aaPredicted RBP12.56□□□□□ -0.4
SYN3-204ENST00000441821 DIS3LQ8TF46 1054 aaKnown RBP12.56□□□□□ -0.4
SYN3-204ENST00000441821 COA7Q96BR5 231 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYN3-204ENST00000441821 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
SYN3-204ENST00000441821 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
SYN3-204ENST00000441821 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 ZFPM1Q8IX07 1006 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 TDHQ8IZJ6 230 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
SYN3-204ENST00000441821 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
SYN3-204ENST00000441821 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
SYN3-204ENST00000441821 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
SYN3-204ENST00000441821 ANKRD13CQ8N6S4 541 aa12.54□□□□□ -0.4
SYN3-204ENST00000441821 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
SYN3-204ENST00000441821 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
SYN3-204ENST00000441821 CTNND1O60716 968 aaKnown RBP12.53□□□□□ -0.4
SYN3-204ENST00000441821 ENTPD3O75355 529 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 HMGCRP04035 888 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 SLC5A1P13866 664 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 MAGEA10P43363 369 aaPredicted RBP12.53□□□□□ -0.4
SYN3-204ENST00000441821 FAM110CQ1W6H9 321 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 LPIN2Q92539 896 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 COL25A1Q9BXS0 654 aaPredicted RBP12.53□□□□□ -0.4
SYN3-204ENST00000441821 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 AGTPBP1Q9UPW5 1226 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
SYN3-204ENST00000441821 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
SYN3-204ENST00000441821 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
SYN3-204ENST00000441821 PRDX5P30044 214 aa12.52□□□□□ -0.41
SYN3-204ENST00000441821 RGS3P49796 1198 aa12.52□□□□□ -0.41
SYN3-204ENST00000441821 C11orf49Q9H6J7 331 aa12.52□□□□□ -0.41
SYN3-204ENST00000441821 HMX1Q9NP08 348 aaPredicted RBP12.52□□□□□ -0.41
SYN3-204ENST00000441821 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
SYN3-204ENST00000441821 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.41
SYN3-204ENST00000441821 DOCK2Q92608 1830 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 PTPRFP10586 1907 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 TRIM75PA6NK02 468 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 SYN1P17600 705 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 PROCA1Q8NCQ7 364 aaPredicted RBP12.51□□□□□ -0.41
SYN3-204ENST00000441821 UBE2OQ9C0C9 1292 aaKnown RBP12.51□□□□□ -0.41
SYN3-204ENST00000441821 GJD2Q9UKL4 321 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 OGDHLQ9ULD0 1010 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 PHIPQ8WWQ0 1821 aa12.51□□□□□ -0.41
SYN3-204ENST00000441821 EYA2O00167 538 aa12.5□□□□□ -0.41
SYN3-204ENST00000441821 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
SYN3-204ENST00000441821 TREML2Q5T2D2 321 aa12.5□□□□□ -0.41
SYN3-204ENST00000441821 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
SYN3-204ENST00000441821 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
SYN3-204ENST00000441821 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
SYN3-204ENST00000441821 GNL3LQ9NVN8 582 aaKnown RBP12.5□□□□□ -0.41
SYN3-204ENST00000441821 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
SYN3-204ENST00000441821 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
SYN3-204ENST00000441821 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
SYN3-204ENST00000441821 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
SYN3-204ENST00000441821 GAKO14976 1311 aa12.49□□□□□ -0.41
SYN3-204ENST00000441821 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
SYN3-204ENST00000441821 TRIM32Q13049 653 aa12.49□□□□□ -0.41
SYN3-204ENST00000441821 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
SYN3-204ENST00000441821 PFASO15067 1338 aa12.48□□□□□ -0.41
SYN3-204ENST00000441821 SEMA3EO15041 775 aa12.48□□□□□ -0.41
SYN3-204ENST00000441821 ZBTB22O15209 634 aa12.48□□□□□ -0.41
SYN3-204ENST00000441821 TBC1D12O60347 775 aa12.48□□□□□ -0.41
SYN3-204ENST00000441821 SLURP2P0DP57 97 aa12.48□□□□□ -0.41
SYN3-204ENST00000441821 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
SYN3-204ENST00000441821 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYN3-204ENST00000441821 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
SYN3-204ENST00000441821 FAM109BQ6ICB4 259 aaPredicted RBP12.48□□□□□ -0.41
SYN3-204ENST00000441821 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
SYN3-204ENST00000441821 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
SYN3-204ENST00000441821 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
SYN3-204ENST00000441821 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
SYN3-204ENST00000441821 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
SYN3-204ENST00000441821 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
SYN3-204ENST00000441821 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
SYN3-204ENST00000441821 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
SYN3-204ENST00000441821 TRIB2Q92519 343 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms