RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 RRP12Q5JTH9 1297 aaKnown RBP28.17■■■□□ 2.1
PDPK1-204ENST00000441549 TMTC2Q8N394 836 aa28.17■■■□□ 2.1
PDPK1-204ENST00000441549 MPNDQ8N594 471 aa28.17■■■□□ 2.1
PDPK1-204ENST00000441549 COA1Q9GZY4 146 aa28.17■■■□□ 2.1
PDPK1-204ENST00000441549 TOMM22Q9NS69 142 aa28.17■■■□□ 2.1
PDPK1-204ENST00000441549 FAM205AQ6ZU69 1335 aa28.17■■■□□ 2.1
PDPK1-204ENST00000441549 TCHHQ07283 1943 aa28.16■■■□□ 2.1
PDPK1-204ENST00000441549 CPLX1O14810 134 aa28.16■■■□□ 2.1
PDPK1-204ENST00000441549 METAP2P50579 478 aaKnown RBP eCLIP28.16■■■□□ 2.1
PDPK1-204ENST00000441549 NFXL1Q6ZNB6 911 aa28.16■■■□□ 2.1
PDPK1-204ENST00000441549 RGS22Q8NE09 1264 aa28.16■■■□□ 2.1
PDPK1-204ENST00000441549 GDPD2Q9HCC8 539 aa28.16■■■□□ 2.1
PDPK1-204ENST00000441549 ARPP21Q9UBL0 812 aaPredicted RBP28.16■■■□□ 2.1
PDPK1-204ENST00000441549 GOLGA6L3A6NEY3 463 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 KRT85P78386 507 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 L1TD1Q5T7N2 865 aaKnown RBP28.15■■■□□ 2.1
PDPK1-204ENST00000441549 STYK1Q6J9G0 422 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 NOL10Q9BSC4 688 aaKnown RBP28.15■■■□□ 2.1
PDPK1-204ENST00000441549 ERICH2A1L162 156 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 USP17L12C9JPN9 530 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 USP17L21D6R901 530 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 ZBTB43O43298 467 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 FDPSP14324 419 aaKnown RBP28.15■■■□□ 2.1
PDPK1-204ENST00000441549 CAVIN1Q6NZI2 390 aaKnown RBP28.15■■■□□ 2.1
PDPK1-204ENST00000441549 FERMT3Q86UX7 667 aa28.15■■■□□ 2.1
PDPK1-204ENST00000441549 NID2Q14112 1375 aa28.14■■■□□ 2.1
PDPK1-204ENST00000441549 CCDC69A6NI79 296 aa28.14■■■□□ 2.1
PDPK1-204ENST00000441549 CDKL5O76039 1030 aa28.14■■■□□ 2.1
PDPK1-204ENST00000441549 RESTQ13127 1097 aa28.14■■■□□ 2.1
PDPK1-204ENST00000441549 CPLX2Q6PUV4 134 aaKnown RBP28.14■■■□□ 2.1
PDPK1-204ENST00000441549 C2CD5Q86YS7 1000 aa28.14■■■□□ 2.1
PDPK1-204ENST00000441549 MROH7-TTC4A0A0A0MT08 1334 aa28.14■■■□□ 2.09
PDPK1-204ENST00000441549 BAZ2AQ9UIF9 1905 aaKnown RBP28.13■■■□□ 2.09
PDPK1-204ENST00000441549 WTAPQ15007 396 aa28.13■■■□□ 2.09
PDPK1-204ENST00000441549 GRIK5Q16478 980 aa28.13■■■□□ 2.09
PDPK1-204ENST00000441549 DPP8Q6V1X1 898 aaPredicted RBP28.13■■■□□ 2.09
PDPK1-204ENST00000441549 SYNE3Q6ZMZ3 975 aa28.13■■■□□ 2.09
PDPK1-204ENST00000441549 SLF2Q8IX21 1173 aa28.13■■■□□ 2.09
PDPK1-204ENST00000441549 ZC3H12CQ9C0D7 883 aaKnown RBP28.13■■■□□ 2.09
PDPK1-204ENST00000441549 SLC12A7Q9Y666 1083 aa28.13■■■□□ 2.09
PDPK1-204ENST00000441549 H0YIN7 160 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 SLC3A2P08195 630 aaKnown RBP28.12■■■□□ 2.09
PDPK1-204ENST00000441549 NT5C2P49902 561 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 RCAN1P53805 252 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 UBE2HP62256 183 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 FAM163AQ96GL9 167 aaPredicted RBP28.12■■■□□ 2.09
PDPK1-204ENST00000441549 SENP2Q9HC62 589 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 LAMB1P07942 1786 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 FIBPO43427 364 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 BAG6P46379 1132 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 SF3B2Q13435 895 aaKnown RBP28.12■■■□□ 2.09
PDPK1-204ENST00000441549 ZNF622Q969S3 477 aaKnown RBP eCLIP28.12■■■□□ 2.096e-6■■□□□ 13
PDPK1-204ENST00000441549 UBAC1Q9BSL1 405 aa28.12■■■□□ 2.09
PDPK1-204ENST00000441549 ORC4O43929 436 aa28.11■■■□□ 2.09
PDPK1-204ENST00000441549 GADD45BO75293 160 aaPredicted RBP28.11■■■□□ 2.09
PDPK1-204ENST00000441549 MFSD14BQ5SR56 506 aa28.11■■■□□ 2.09
PDPK1-204ENST00000441549 ORC3Q9UBD5 711 aaPredicted RBP28.11■■■□□ 2.09
PDPK1-204ENST00000441549 MKRN1Q9UHC7 482 aaKnown RBP28.11■■■□□ 2.09
PDPK1-204ENST00000441549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.11■■■□□ 2.09
PDPK1-204ENST00000441549 SUGT1Q9Y2Z0 365 aa28.11■■■□□ 2.09
PDPK1-204ENST00000441549 CYP2D7A0A087X1C5 515 aa28.1■■■□□ 2.09
PDPK1-204ENST00000441549 ZNF445P59923 1031 aa28.1■■■□□ 2.09
PDPK1-204ENST00000441549 DIXDC1Q155Q3 683 aa28.1■■■□□ 2.09
PDPK1-204ENST00000441549 EYA3Q99504 573 aa28.1■■■□□ 2.09
PDPK1-204ENST00000441549 RTFDC1Q9BY42 306 aaPredicted RBP28.1■■■□□ 2.09
PDPK1-204ENST00000441549 SCAND2PQ9GZW5 306 aaPredicted RBP28.1■■■□□ 2.09
PDPK1-204ENST00000441549 ELP1O95163 1332 aa28.1■■■□□ 2.09
PDPK1-204ENST00000441549 GOLGA8AA7E2F4 631 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 RAB11FIP4Q86YS3 637 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 STK11IPQ8N1F8 1099 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 GPR75-ASB3A0A0A6YYF3 556 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 USP5P45974 858 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 ZSCAN23Q3MJ62 389 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 MICU3Q86XE3 530 aa28.09■■■□□ 2.09
PDPK1-204ENST00000441549 SH3RF3Q8TEJ3 882 aaPredicted RBP28.09■■■□□ 2.09
PDPK1-204ENST00000441549 SYAP1Q96A49 352 aaPredicted RBP28.09■■■□□ 2.09
PDPK1-204ENST00000441549 MYH2Q9UKX2 1941 aa28.08■■■□□ 2.09
PDPK1-204ENST00000441549 RIMBP2O15034 1052 aa28.08■■■□□ 2.09
PDPK1-204ENST00000441549 PLCG2P16885 1265 aa28.08■■■□□ 2.09
PDPK1-204ENST00000441549 ADD1P35611 737 aaKnown RBP28.08■■■□□ 2.09
PDPK1-204ENST00000441549 SEC23AQ15436 765 aa28.08■■■□□ 2.09
PDPK1-204ENST00000441549 ZKSCAN3Q9BRR0 538 aa28.08■■■□□ 2.09
PDPK1-204ENST00000441549 CNKSR1Q969H4 720 aa28.07■■■□□ 2.08
PDPK1-204ENST00000441549 C8orf76Q96K31 380 aa28.07■■■□□ 2.08
PDPK1-204ENST00000441549 MCM9Q9NXL9 1143 aa28.07■■■□□ 2.08
PDPK1-204ENST00000441549 GAKO14976 1311 aa28.07■■■□□ 2.08
PDPK1-204ENST00000441549 TNKSO95271 1327 aa28.07■■■□□ 2.08
PDPK1-204ENST00000441549 SMIM22K7EJ46 135 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 CDC27P30260 824 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 GTF2IP78347 998 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 PDE4BQ07343 736 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 IQCA1Q86XH1 822 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 ZSCAN10Q96SZ4 725 aaPredicted RBP28.06■■■□□ 2.08
PDPK1-204ENST00000441549 FAM217BQ9NTX9 383 aaPredicted RBP28.06■■■□□ 2.08
PDPK1-204ENST00000441549 TMEM63CQ9P1W3 806 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 BTDP43251 543 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 PPP2R5BQ15173 497 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 NTRK3Q16288 839 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 ATL3Q6DD88 541 aa28.06■■■□□ 2.08
PDPK1-204ENST00000441549 FAM173BQ6P4H8 233 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms