RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 STRIP1Q5VSL9 837 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 GIMAP6Q6P9H5 292 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 MFSD6Q6ZSS7 791 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 KIAA0825Q8IV33 1275 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 TGFBRAP1Q8WUH2 860 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 SUGT1Q9Y2Z0 365 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 USP17L3A6NCW0 530 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 USP17L4A6NCW7 530 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 KDM4AO75164 1064 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 USP17L8P0C7I0 530 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 GRIPAP1Q4V328 841 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 USP17L1Q7RTZ2 530 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 MAPKAPK5Q8IW41 473 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 LARGE2Q8N3Y3 721 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 MCM9Q9NXL9 1143 aa22.54■■□□□ 1.2
SNX17-203ENST00000440760 RHBDL3P58872 404 aa22.53■■□□□ 1.2
SNX17-203ENST00000440760 SLF2Q8IX21 1173 aa22.53■■□□□ 1.2
SNX17-203ENST00000440760 TEX11Q8IYF3 940 aa22.53■■□□□ 1.2
SNX17-203ENST00000440760 FAM163AQ96GL9 167 aaPredicted RBP22.53■■□□□ 1.2
SNX17-203ENST00000440760 CWC22Q9HCG8 908 aaKnown RBP22.53■■□□□ 1.2
SNX17-203ENST00000440760 MKRN1Q9UHC7 482 aaKnown RBP22.53■■□□□ 1.2
SNX17-203ENST00000440760 ANAPC4Q9UJX5 808 aa22.53■■□□□ 1.2
SNX17-203ENST00000440760 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
SNX17-203ENST00000440760 BCS1LQ9Y276 419 aa22.53■■□□□ 1.2
SNX17-203ENST00000440760 ILDR2Q71H61 639 aa22.52■■□□□ 1.2
SNX17-203ENST00000440760 SOGA3Q5TF21 947 aa22.52■■□□□ 1.2
SNX17-203ENST00000440760 ARPP21Q9UBL0 812 aaPredicted RBP22.52■■□□□ 1.2
SNX17-203ENST00000440760 PCDHAC2Q9Y5I4 1007 aa22.52■■□□□ 1.2
SNX17-203ENST00000440760 PRDM1O75626 825 aa22.51■■□□□ 1.19
SNX17-203ENST00000440760 RAB3GAP1Q15042 981 aa22.51■■□□□ 1.19
SNX17-203ENST00000440760 SAP30BPQ9UHR5 308 aaKnown RBP22.51■■□□□ 1.19
SNX17-203ENST00000440760 MYH1P12882 1939 aa22.51■■□□□ 1.19
SNX17-203ENST00000440760 ECM29Q5VYK3 1845 aa22.51■■□□□ 1.19
SNX17-203ENST00000440760 RAB11FIP4Q86YS3 637 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 GTF3C6Q969F1 213 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 RNF41Q9H4P4 317 aaPredicted RBP22.5■■□□□ 1.19
SNX17-203ENST00000440760 CNNM2Q9H8M5 875 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 SENP2Q9HC62 589 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 ZSWIM5Q9P217 1185 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 WDR19Q8NEZ3 1342 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 NFKBIBQ15653 356 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 ZKSCAN3Q9BRR0 538 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 KRT23Q9C075 422 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 BRPF3Q9ULD4 1205 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 SMC3Q9UQE7 1217 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.5■■□□□ 1.19
SNX17-203ENST00000440760 SRCAPQ6ZRS2 3230 aa22.5■■□□□ 1.19
SNX17-203ENST00000440760 FLT1P17948 1338 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 NFKBIEO00221 500 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 SH2B2O14492 632 aaPredicted RBP22.49■■□□□ 1.19
SNX17-203ENST00000440760 RAD17O75943 681 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 CRKP46108 304 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 SCRN1Q12765 414 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 TEKT1Q969V4 418 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
SNX17-203ENST00000440760 CCT2P78371 535 aaKnown RBP22.49■■□□□ 1.19
SNX17-203ENST00000440760 SBK1Q52WX2 424 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 FBXL16Q8N461 479 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 TNPO1Q92973 898 aaKnown RBP22.49■■□□□ 1.19
SNX17-203ENST00000440760 TAOK3Q9H2K8 898 aa22.49■■□□□ 1.19
SNX17-203ENST00000440760 KLF18A0A0U1RQI7 1052 aa22.48■■□□□ 1.19
SNX17-203ENST00000440760 PLCG2P16885 1265 aa22.48■■□□□ 1.19
SNX17-203ENST00000440760 GJB2P29033 226 aa22.48■■□□□ 1.19
SNX17-203ENST00000440760 FKBP1AP62942 108 aaKnown RBP22.48■■□□□ 1.19
SNX17-203ENST00000440760 FOXD4L5Q5VV16 416 aaPredicted RBP22.48■■□□□ 1.19
SNX17-203ENST00000440760 FOXD4L4Q8WXT5 416 aaPredicted RBP22.48■■□□□ 1.19
SNX17-203ENST00000440760 NCOA5Q9HCD5 579 aaKnown RBP22.48■■□□□ 1.19
SNX17-203ENST00000440760 ANGEL1Q9UNK9 670 aaKnown RBP22.48■■□□□ 1.19
SNX17-203ENST00000440760 ARFGEF1Q9Y6D6 1849 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 PFKFB2O60825 505 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 PDIA3P30101 505 aaKnown RBP22.47■■□□□ 1.19
SNX17-203ENST00000440760 PICALMQ13492 652 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 CERS3Q8IU89 383 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 SPON1Q9HCB6 807 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 ZDHHC9Q9Y397 364 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 GOLGA8BA8MQT2 603 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 TMEM67Q5HYA8 995 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 C12orf60Q5U649 245 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 DYNLL2Q96FJ2 89 aa22.47■■□□□ 1.19
SNX17-203ENST00000440760 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.47■■□□□ 1.19
SNX17-203ENST00000440760 PSMD14O00487 310 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 JAK2O60674 1132 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 RASSF7Q02833 373 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 APOBEC3HQ6NTF7 200 aaKnown RBP22.46■■□□□ 1.19
SNX17-203ENST00000440760 HHIPL2Q6UWX4 724 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 NIM1KQ8IY84 436 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 IGDCC4Q8TDY8 1250 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 LY9Q9HBG7 655 aa22.46■■□□□ 1.19
SNX17-203ENST00000440760 IFIT3O14879 490 aaKnown RBP22.45■■□□□ 1.18
SNX17-203ENST00000440760 RANBP6O60518 1105 aaKnown RBP22.45■■□□□ 1.18
SNX17-203ENST00000440760 PLCD1P51178 756 aa22.45■■□□□ 1.18
SNX17-203ENST00000440760 RBM5P52756 815 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNX17-203ENST00000440760 TMEM87BQ96K49 555 aa22.45■■□□□ 1.18
SNX17-203ENST00000440760 DDX4Q9NQI0 724 aaKnown RBP22.45■■□□□ 1.18
SNX17-203ENST00000440760 NUCB2P80303 420 aa22.45■■□□□ 1.18
SNX17-203ENST00000440760 CDC42EP5Q6NZY7 148 aa22.45■■□□□ 1.18
SNX17-203ENST00000440760 ESR2Q92731 530 aa22.45■■□□□ 1.18
SNX17-203ENST00000440760 ZNF274Q96GC6 653 aaPredicted RBP22.45■■□□□ 1.18
SNX17-203ENST00000440760 USP40Q9NVE5 1235 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms