RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 LDLRAD1Q5T700 205 aa21.87■■□□□ 1.09
CPSF4-205ENST00000440514 CLMNQ96JQ2 1002 aa21.87■■□□□ 1.09
CPSF4-205ENST00000440514 ATRNL1Q5VV63 1379 aa21.87■■□□□ 1.09
CPSF4-205ENST00000440514 TCRBV5S4A2TA0A5A2 114 aa21.86■■□□□ 1.09
CPSF4-205ENST00000440514 CHGBP05060 677 aa21.86■■□□□ 1.09
CPSF4-205ENST00000440514 IREB2P48200 963 aaKnown RBP21.86■■□□□ 1.09
CPSF4-205ENST00000440514 NUCB1Q02818 461 aa21.86■■□□□ 1.09
CPSF4-205ENST00000440514 ZSCAN29Q8IWY8 852 aaPredicted RBP21.86■■□□□ 1.09
CPSF4-205ENST00000440514 ZIC5Q96T25 663 aa21.86■■□□□ 1.09
CPSF4-205ENST00000440514 COL2A1P02458 1487 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-205ENST00000440514 DDTLA6NHG4 134 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-205ENST00000440514 ERC2O15083 957 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 GLRX3O76003 335 aaKnown RBP21.85■■□□□ 1.09
CPSF4-205ENST00000440514 PLCG2P16885 1265 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 ADD2P35612 726 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 MIGA2Q7L4E1 593 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 CHD1LQ86WJ1 897 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 CSRNP1Q96S65 589 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.85■■□□□ 1.09
CPSF4-205ENST00000440514 OSBPL5Q9H0X9 879 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-205ENST00000440514 SIPA1L1O43166 1804 aa21.85■■□□□ 1.09
CPSF4-205ENST00000440514 FLT1P17948 1338 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 NAV1Q8NEY1 1877 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 DDX60LQ5H9U9 1706 aaKnown RBP21.84■■□□□ 1.09
CPSF4-205ENST00000440514 NOGQ13253 232 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 TMED8Q6PL24 325 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-205ENST00000440514 MAPKAPK5Q8IW41 473 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.84■■□□□ 1.09
CPSF4-205ENST00000440514 TGFBRAP1Q8WUH2 860 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 CCDC102AQ96A19 550 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 HOOK2Q96ED9 719 aa21.84■■□□□ 1.09
CPSF4-205ENST00000440514 RIOK1Q9BRS2 568 aaKnown RBP21.84■■□□□ 1.09
CPSF4-205ENST00000440514 MAGEB6P1A0A0J9YX57 407 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 NPM3O75607 178 aaKnown RBP21.83■■□□□ 1.09
CPSF4-205ENST00000440514 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.09
CPSF4-205ENST00000440514 SLURP2P0DP57 97 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 PDE1AP54750 535 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 DCAF15Q66K64 600 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 ANKRD13AQ8IZ07 590 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 WRNIP1Q96S55 665 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 STAP2Q9UGK3 403 aa21.83■■□□□ 1.09
CPSF4-205ENST00000440514 MKRN3Q13064 507 aaKnown RBP21.82■■□□□ 1.08
CPSF4-205ENST00000440514 VGLL4Q14135 290 aa21.82■■□□□ 1.08
CPSF4-205ENST00000440514 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.82■■□□□ 1.08
CPSF4-205ENST00000440514 KBTBD3Q8NAB2 608 aa21.82■■□□□ 1.08
CPSF4-205ENST00000440514 ZNF341Q9BYN7 854 aa21.82■■□□□ 1.08
CPSF4-205ENST00000440514 ELP3Q9H9T3 547 aa21.82■■□□□ 1.08
CPSF4-205ENST00000440514 HSPA1AP0DMV8 641 aaKnown RBP21.81■■□□□ 1.08
CPSF4-205ENST00000440514 HSPA1BP0DMV9 641 aaKnown RBP21.81■■□□□ 1.08
CPSF4-205ENST00000440514 MAP2K2P36507 400 aa21.81■■□□□ 1.08
CPSF4-205ENST00000440514 LCORLQ8N3X6 602 aa21.81■■□□□ 1.08
CPSF4-205ENST00000440514 MYH1P12882 1939 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 MBD4O95243 580 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 KIF23Q02241 960 aaPredicted RBP21.8■■□□□ 1.08
CPSF4-205ENST00000440514 UBE3CQ15386 1083 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 ZSCAN25Q6NSZ9 544 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 CERS3Q8IU89 383 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 SLC10A4Q96EP9 437 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 ARMT1Q9H993 441 aa21.8■■□□□ 1.08
CPSF4-205ENST00000440514 SAP30BPQ9UHR5 308 aaKnown RBP21.8■■□□□ 1.08
CPSF4-205ENST00000440514 LAMB1P07942 1786 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 FAM196BA6NMK8 535 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 INPP5BP32019 993 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 USP5P45974 858 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 MAP3K9P80192 1104 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 SLC4A8Q2Y0W8 1093 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 ZKSCAN4Q969J2 545 aaPredicted RBP21.79■■□□□ 1.08
CPSF4-205ENST00000440514 WNK4Q96J92 1243 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 CSADQ9Y600 493 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 SNCAIPQ9Y6H5 919 aa21.79■■□□□ 1.08
CPSF4-205ENST00000440514 UNCXA6NJT0 531 aa21.78■■□□□ 1.08
CPSF4-205ENST00000440514 GJA5P36382 358 aa21.78■■□□□ 1.08
CPSF4-205ENST00000440514 SPRYD7Q5W111 196 aa21.78■■□□□ 1.08
CPSF4-205ENST00000440514 PLEKHM2Q8IWE5 1019 aa21.78■■□□□ 1.08
CPSF4-205ENST00000440514 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
CPSF4-205ENST00000440514 FSD1Q9BTV5 496 aa21.78■■□□□ 1.08
CPSF4-205ENST00000440514 DOCK1Q14185 1865 aa21.77■■□□□ 1.08
CPSF4-205ENST00000440514 MAP2K1Q02750 393 aaPredicted RBP21.77■■□□□ 1.08
CPSF4-205ENST00000440514 CRNKL1Q9BZJ0 848 aaKnown RBP21.77■■□□□ 1.08
CPSF4-205ENST00000440514 PUS7LQ9H0K6 701 aaKnown RBP21.77■■□□□ 1.08
CPSF4-205ENST00000440514 WBP1LQ9NX94 342 aa21.77■■□□□ 1.08
CPSF4-205ENST00000440514 ZNF112Q9UJU3 913 aa21.77■■□□□ 1.08
CPSF4-205ENST00000440514 PALD1Q9ULE6 856 aa21.77■■□□□ 1.08
CPSF4-205ENST00000440514 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
CPSF4-205ENST00000440514 PDE4AP27815 886 aa21.76■■□□□ 1.07
CPSF4-205ENST00000440514 SDR42E1Q8WUS8 393 aa21.76■■□□□ 1.07
CPSF4-205ENST00000440514 OPTNQ96CV9 577 aa21.76■■□□□ 1.07
CPSF4-205ENST00000440514 PRKAB2O43741 272 aa21.75■■□□□ 1.07
CPSF4-205ENST00000440514 MAP3K10Q02779 954 aa21.75■■□□□ 1.07
CPSF4-205ENST00000440514 APPBP2Q92624 585 aa21.75■■□□□ 1.07
CPSF4-205ENST00000440514 OTUD5Q96G74 571 aa21.75■■□□□ 1.07
CPSF4-205ENST00000440514 DHX36Q9H2U1 1008 aaKnown RBP21.75■■□□□ 1.07
CPSF4-205ENST00000440514 PCNTO95613 3336 aa21.74■■□□□ 1.07
CPSF4-205ENST00000440514 ATAD5Q96QE3 1844 aa21.74■■□□□ 1.07
CPSF4-205ENST00000440514 PHF20L1A8MW92 1017 aa21.74■■□□□ 1.07
CPSF4-205ENST00000440514 FOXN1O15353 648 aa21.74■■□□□ 1.07
CPSF4-205ENST00000440514 ZBTB48P10074 688 aaPredicted RBP21.74■■□□□ 1.07
CPSF4-205ENST00000440514 OSBP2Q969R2 916 aa21.74■■□□□ 1.07
CPSF4-205ENST00000440514 AIDAQ96BJ3 306 aa21.74■■□□□ 1.07
CPSF4-205ENST00000440514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.74■■□□□ 1.076e-7■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms