RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 SNAPC2Q13487 334 aa20.72■□□□□ 0.91
COL16A1-204ENST00000440437 TNNI3KQ59H18 835 aa20.72■□□□□ 0.91
COL16A1-204ENST00000440437 GORABQ5T7V8 394 aa20.72■□□□□ 0.91
COL16A1-204ENST00000440437 ZCCHC17Q9NP64 241 aaKnown RBP20.72■□□□□ 0.91
COL16A1-204ENST00000440437 DDX4Q9NQI0 724 aaKnown RBP20.72■□□□□ 0.91
COL16A1-204ENST00000440437 FPGT-TNNI3KV9GXZ4 949 aa20.72■□□□□ 0.91
COL16A1-204ENST00000440437 GPR75-ASB3A0A0A6YYF3 556 aa20.71■□□□□ 0.91
COL16A1-204ENST00000440437 RHBDL3P58872 404 aa20.71■□□□□ 0.91
COL16A1-204ENST00000440437 SH3BP5LQ7L8J4 393 aa20.71■□□□□ 0.91
COL16A1-204ENST00000440437 NSUN4Q96CB9 384 aaKnown RBP20.71■□□□□ 0.91
COL16A1-204ENST00000440437 ZFYVE28Q9HCC9 887 aa20.71■□□□□ 0.91
COL16A1-204ENST00000440437 ATAD5Q96QE3 1844 aa20.71■□□□□ 0.91
COL16A1-204ENST00000440437 BTBD19C9JJ37 291 aa20.7■□□□□ 0.9
COL16A1-204ENST00000440437 UQCRFS1P1P0C7P4 283 aa20.7■□□□□ 0.9
COL16A1-204ENST00000440437 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
COL16A1-204ENST00000440437 KCNH4Q9UQ05 1017 aa20.7■□□□□ 0.9
COL16A1-204ENST00000440437 NOP58Q9Y2X3 529 aaKnown RBP20.7■□□□□ 0.9
COL16A1-204ENST00000440437 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-204ENST00000440437 SIPA1L1O43166 1804 aa20.69■□□□□ 0.9
COL16A1-204ENST00000440437 DDTLA6NHG4 134 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-204ENST00000440437 PHF20L1A8MW92 1017 aa20.69■□□□□ 0.9
COL16A1-204ENST00000440437 SURF6O75683 361 aaKnown RBP20.69■□□□□ 0.9
COL16A1-204ENST00000440437 MAP3K10Q02779 954 aa20.69■□□□□ 0.9
COL16A1-204ENST00000440437 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-204ENST00000440437 DBNDD2Q9BQY9 259 aa20.69■□□□□ 0.9
COL16A1-204ENST00000440437 OS9Q13438 667 aaPredicted RBP20.68■□□□□ 0.9
COL16A1-204ENST00000440437 PTPN22Q9Y2R2 807 aa20.68■□□□□ 0.9
COL16A1-204ENST00000440437 TLR2O60603 784 aa20.67■□□□□ 0.9
COL16A1-204ENST00000440437 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
COL16A1-204ENST00000440437 GSTO1P78417 241 aa20.67■□□□□ 0.9
COL16A1-204ENST00000440437 PICALMQ13492 652 aa20.67■□□□□ 0.9
COL16A1-204ENST00000440437 CEP85Q6P2H3 762 aa20.67■□□□□ 0.9
COL16A1-204ENST00000440437 EFCC1Q9HA90 598 aa20.67■□□□□ 0.9
COL16A1-204ENST00000440437 RAI14Q9P0K7 980 aa20.67■□□□□ 0.9
COL16A1-204ENST00000440437 CENPFP49454 3210 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 MAP4K4O95819 1239 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-204ENST00000440437 LDHCP07864 332 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 SLURP2P0DP57 97 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 MOGSQ13724 837 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 TTC39AQ5SRH9 613 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 ANKRD23Q86SG2 305 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 ZSCAN29Q8IWY8 852 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-204ENST00000440437 SCYL3Q8IZE3 742 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 PANK1Q8TE04 598 aa20.66■□□□□ 0.9
COL16A1-204ENST00000440437 ZNF512BQ96KM6 892 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-204ENST00000440437 CCDC158Q5M9N0 1113 aa20.65■□□□□ 0.9
COL16A1-204ENST00000440437 DBNLQ9UJU6 430 aaKnown RBP20.65■□□□□ 0.9
COL16A1-204ENST00000440437 ADGRA2Q96PE1 1338 aa20.64■□□□□ 0.89
COL16A1-204ENST00000440437 SNRKQ9NRH2 765 aa20.64■□□□□ 0.89
COL16A1-204ENST00000440437 TLR7Q9NYK1 1049 aaKnown RBP20.64■□□□□ 0.89
COL16A1-204ENST00000440437 LRP2BPQ9P2M1 347 aa20.64■□□□□ 0.89
COL16A1-204ENST00000440437 MGAMO43451 1857 aa20.64■□□□□ 0.89
COL16A1-204ENST00000440437 CXCL11O14625 94 aa20.63■□□□□ 0.89
COL16A1-204ENST00000440437 CYP2E1P05181 493 aaPredicted RBP20.63■□□□□ 0.89
COL16A1-204ENST00000440437 PTPRAP18433 802 aa20.63■□□□□ 0.89
COL16A1-204ENST00000440437 EAF2Q96CJ1 260 aaPredicted RBP20.63■□□□□ 0.89
COL16A1-204ENST00000440437 OSBPL5Q9H0X9 879 aaPredicted RBP20.63■□□□□ 0.89
COL16A1-204ENST00000440437 LOC285556D6RIA3 1793 aa20.63■□□□□ 0.89
COL16A1-204ENST00000440437 PDHXO00330 501 aa20.62■□□□□ 0.89
COL16A1-204ENST00000440437 TBC1D12O60347 775 aa20.62■□□□□ 0.89
COL16A1-204ENST00000440437 C17orf99Q6UX52 265 aa20.62■□□□□ 0.89
COL16A1-204ENST00000440437 A0A0G2JLL6 359 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-204ENST00000440437 CTNND1O60716 968 aaKnown RBP20.61■□□□□ 0.89
COL16A1-204ENST00000440437 ZAP70P43403 619 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 LACTBP83111 547 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-204ENST00000440437 ARHGEF6Q15052 776 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 NAA16Q6N069 864 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-204ENST00000440437 GPAT2Q6NUI2 795 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 PRRT2Q7Z6L0 340 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-204ENST00000440437 ARMC5Q96C12 935 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 ARHGAP39Q9C0H5 1083 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 CCDC8Q9H0W5 538 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-204ENST00000440437 PICK1Q9NRD5 415 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 AFG3L2Q9Y4W6 797 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 PDE4DIPQ5VU43 2346 aa20.61■□□□□ 0.89
COL16A1-204ENST00000440437 IGSF3O75054 1194 aa20.6■□□□□ 0.89
COL16A1-204ENST00000440437 MS4A1P11836 297 aa20.6■□□□□ 0.89
COL16A1-204ENST00000440437 ADGRA1Q86SQ6 560 aa20.6■□□□□ 0.89
COL16A1-204ENST00000440437 TEX11Q8IYF3 940 aa20.6■□□□□ 0.89
COL16A1-204ENST00000440437 SH3RF3Q8TEJ3 882 aaPredicted RBP20.6■□□□□ 0.89
COL16A1-204ENST00000440437 EXOC6BQ9Y2D4 811 aa20.6■□□□□ 0.89
COL16A1-204ENST00000440437 ZHX2Q9Y6X8 837 aa20.6■□□□□ 0.89
COL16A1-204ENST00000440437 MYH1P12882 1939 aa20.59■□□□□ 0.89
COL16A1-204ENST00000440437 FAM196BA6NMK8 535 aa20.59■□□□□ 0.89
COL16A1-204ENST00000440437 PPP4CP60510 307 aa20.59■□□□□ 0.89
COL16A1-204ENST00000440437 PIH1D3Q9NQM4 214 aaKnown RBP20.59■□□□□ 0.89
COL16A1-204ENST00000440437 AATFQ9NY61 560 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL16A1-204ENST00000440437 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-204ENST00000440437 CPA4Q9UI42 421 aa20.59■□□□□ 0.89
COL16A1-204ENST00000440437 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
COL16A1-204ENST00000440437 ERC1Q8IUD2 1116 aa20.58■□□□□ 0.89
COL16A1-204ENST00000440437 NOL10Q9BSC4 688 aaKnown RBP20.58■□□□□ 0.89
COL16A1-204ENST00000440437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.58■□□□□ 0.89
COL16A1-204ENST00000440437 BRCA2P51587 3418 aa20.58■□□□□ 0.88
COL16A1-204ENST00000440437 POTEFA5A3E0 1075 aa20.57■□□□□ 0.88
COL16A1-204ENST00000440437 BAG3O95817 575 aa20.57■□□□□ 0.88
COL16A1-204ENST00000440437 PLCG2P16885 1265 aa20.57■□□□□ 0.88
COL16A1-204ENST00000440437 CTGFP29279 349 aa20.57■□□□□ 0.88
COL16A1-204ENST00000440437 KIF22Q14807 665 aa20.57■□□□□ 0.88
COL16A1-204ENST00000440437 DDX60LQ5H9U9 1706 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms