RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 PKP1Q13835 747 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 DALRD3Q5D0E6 543 aaKnown RBP13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 GIMAP6Q6P9H5 292 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 SLF2Q8IX21 1173 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 TGFBRAP1Q8WUH2 860 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 ATP8A2Q9NTI2 1148 aa13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
SMPD4P2-201ENST00000440167 USP17L3A6NCW0 530 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 USP17L4A6NCW7 530 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 KDM4AO75164 1064 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 USP17L8P0C7I0 530 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 DACT2Q5SW24 774 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 STRIP1Q5VSL9 837 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 USP17L1Q7RTZ2 530 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 MCM9Q9NXL9 1143 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 ANAPC4Q9UJX5 808 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 NLGN2Q8NFZ4 835 aa13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.53□□□□□ -0.24
SMPD4P2-201ENST00000440167 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.24
SMPD4P2-201ENST00000440167 PRDM1O75626 825 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 RHBDL3P58872 404 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 GTF3C6Q969F1 213 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 KRT23Q9C075 422 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 RNF41Q9H4P4 317 aaPredicted RBP13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 MKRN1Q9UHC7 482 aaKnown RBP13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 BCS1LQ9Y276 419 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 PCDHAC2Q9Y5I4 1007 aa13.52□□□□□ -0.25
SMPD4P2-201ENST00000440167 TCHHQ07283 1943 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 GJB2P29033 226 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 SCRN1Q12765 414 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 SBK1Q52WX2 424 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 ZKSCAN3Q9BRR0 538 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 SENP2Q9HC62 589 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 FLT1P17948 1338 aa13.51□□□□□ -0.25
SMPD4P2-201ENST00000440167 KLF18A0A0U1RQI7 1052 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 PFKFB2O60825 505 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 PLCG2P16885 1265 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 CRKP46108 304 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 FOXD4L5Q5VV16 416 aaPredicted RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 FOXD4L4Q8WXT5 416 aaPredicted RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 TEKT1Q969V4 418 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 ZDHHC9Q9Y397 364 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 MYH6P13533 1939 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 RAD17O75943 681 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 NUCB2P80303 420 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 PICALMQ13492 652 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 TMEM67Q5HYA8 995 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 CERS3Q8IU89 383 aa13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 ANGEL1Q9UNK9 670 aaKnown RBP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMPD4P2-201ENST00000440167 GOLGA8BA8MQT2 603 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 NFKBIEO00221 500 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 ESR2Q92731 530 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 TMEM87BQ96K49 555 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 SPON1Q9HCB6 807 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 USP40Q9NVE5 1235 aa13.49□□□□□ -0.25
SMPD4P2-201ENST00000440167 ROBO3Q96MS0 1386 aa13.48□□□□□ -0.25
SMPD4P2-201ENST00000440167 DICER1Q9UPY3 1922 aaKnown RBP13.48□□□□□ -0.25
SMPD4P2-201ENST00000440167 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
SMPD4P2-201ENST00000440167 PSMD14O00487 310 aa13.48□□□□□ -0.25
SMPD4P2-201ENST00000440167 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms