RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 GOLGA6L4A6NEF3 574 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 PFKFB2O60825 505 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 HOXA10P31260 410 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-205ENST00000439958 WTAPQ15007 396 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 SP8Q8IXZ3 490 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-205ENST00000439958 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 ZBTB43O43298 467 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-205ENST00000439958 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.42
CPSF7-205ENST00000439958 BTDP43251 543 aa17.64■□□□□ 0.42
CPSF7-205ENST00000439958 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.42
CPSF7-205ENST00000439958 CNNM2Q9H8M5 875 aa17.64■□□□□ 0.42
CPSF7-205ENST00000439958 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 ESR2Q92731 530 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 DYNLL2Q96FJ2 89 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 LMBRD1Q9NUN5 540 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 TSPY2A6NKD2 308 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
CPSF7-205ENST00000439958 SKOR2Q2VWA4 1001 aaPredicted RBP17.64■□□□□ 0.41
CPSF7-205ENST00000439958 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
CPSF7-205ENST00000439958 TEX11Q8IYF3 940 aa17.64■□□□□ 0.41
CPSF7-205ENST00000439958 TTF2Q9UNY4 1162 aaKnown RBP17.64■□□□□ 0.41
CPSF7-205ENST00000439958 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
CPSF7-205ENST00000439958 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
CPSF7-205ENST00000439958 TACC3Q9Y6A5 838 aa17.63■□□□□ 0.41
CPSF7-205ENST00000439958 NMT2O60551 498 aa17.63■□□□□ 0.41
CPSF7-205ENST00000439958 GSTO1P78417 241 aa17.63■□□□□ 0.41
CPSF7-205ENST00000439958 CTR9Q6PD62 1173 aa17.63■□□□□ 0.41
CPSF7-205ENST00000439958 LDHCP07864 332 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 hCG_1642624A0A1W2PR95 340 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
CPSF7-205ENST00000439958 IQCA1Q86XH1 822 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 SLC44A5Q8NCS7 719 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 AIFM3Q96NN9 605 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 LAMB2P55268 1798 aa17.62■□□□□ 0.41
CPSF7-205ENST00000439958 GOLGA6L3A6NEY3 463 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 CTDNEP1O95476 244 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 ZNF274Q96GC6 653 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-205ENST00000439958 C8orf76Q96K31 380 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 SH2B2O14492 632 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-205ENST00000439958 RAD21O60216 631 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 PTMSP20962 102 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 TNKSO95271 1327 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 HMGN5P82970 282 aaKnown RBP17.61■□□□□ 0.41
CPSF7-205ENST00000439958 ALX1Q15699 326 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 AOC3Q16853 763 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
CPSF7-205ENST00000439958 KRT85P78386 507 aa17.6■□□□□ 0.41
CPSF7-205ENST00000439958 IFIT1BQ5T764 474 aaKnown RBP17.6■□□□□ 0.41
CPSF7-205ENST00000439958 TMEM87BQ96K49 555 aa17.6■□□□□ 0.41
CPSF7-205ENST00000439958 MYH7P12883 1935 aa17.6■□□□□ 0.41
CPSF7-205ENST00000439958 UBE2Q2LH0YL09 131 aa17.6■□□□□ 0.41
CPSF7-205ENST00000439958 GPT2Q8TD30 523 aa17.6■□□□□ 0.41
CPSF7-205ENST00000439958 ALDH8A1Q9H2A2 487 aaPredicted RBP17.6■□□□□ 0.41
CPSF7-205ENST00000439958 STX8Q9UNK0 236 aa17.6■□□□□ 0.41
CPSF7-205ENST00000439958 CACNB3P54284 484 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 PDE4BQ07343 736 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 EYA3Q99504 573 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 STAG1Q8WVM7 1258 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 FTOQ9C0B1 505 aaKnown RBP eCLIP17.59■□□□□ 0.41
CPSF7-205ENST00000439958 LY9Q9HBG7 655 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 PSDA5PKW4 1024 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-205ENST00000439958 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 CDC27P30260 824 aa17.59■□□□□ 0.41
CPSF7-205ENST00000439958 IARSP41252 1262 aaKnown RBP17.59■□□□□ 0.41
CPSF7-205ENST00000439958 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-205ENST00000439958 TCP10Q12799 353 aa17.58■□□□□ 0.41
CPSF7-205ENST00000439958 KLHL40Q2TBA0 621 aa17.58■□□□□ 0.41
CPSF7-205ENST00000439958 CNKSR1Q969H4 720 aa17.58■□□□□ 0.41
CPSF7-205ENST00000439958 SPATA32Q96LK8 384 aa17.58■□□□□ 0.41
CPSF7-205ENST00000439958 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.41
CPSF7-205ENST00000439958 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 IGDCC4Q8TDY8 1250 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 COA1Q9GZY4 146 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 SYCE3A1L190 88 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
CPSF7-205ENST00000439958 TRIM29Q14134 588 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 RTN1Q16799 776 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
CPSF7-205ENST00000439958 ATP2B2Q01814 1243 aa17.57■□□□□ 0.4
CPSF7-205ENST00000439958 R3HDM1Q15032 1099 aaKnown RBP17.57■□□□□ 0.4
CPSF7-205ENST00000439958 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
CPSF7-205ENST00000439958 TBC1D22AQ8WUA7 517 aa17.57■□□□□ 0.4
CPSF7-205ENST00000439958 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
CPSF7-205ENST00000439958 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
CPSF7-205ENST00000439958 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
CPSF7-205ENST00000439958 MROH7-TTC4A0A0A0MT08 1334 aa17.57■□□□□ 0.4
CPSF7-205ENST00000439958 TFAP4Q01664 338 aa17.57■□□□□ 0.4
CPSF7-205ENST00000439958 MYH13Q9UKX3 1938 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms