RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MRPS25P82663 173 aaKnown RBP13.29□□□□□ -0.28
SMPD4-209ENST00000439886 FILIP1LQ4L180 1135 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-209ENST00000439886 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
SMPD4-209ENST00000439886 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 PPM1EQ8WY54 764 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 SLF1Q9BQI6 1058 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
SMPD4-209ENST00000439886 MED23Q9ULK4 1368 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 IKBKBO14920 756 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 TEX33O43247 280 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 CASP1P29466 404 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 CDC27P30260 824 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 CCT5P48643 541 aa13.29□□□□□ -0.28
SMPD4-209ENST00000439886 STX10O60499 249 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 MAGEA9P43362 315 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 METAP2P50579 478 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMPD4-209ENST00000439886 SMYD4Q8IYR2 804 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-209ENST00000439886 AFAP1L1Q8TED9 768 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 CDC23Q9UJX2 597 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 ABCA9Q8IUA7 1624 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 ZNF609O15014 1411 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 COL15A1P39059 1388 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 ZNF213O14771 459 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMPD4-209ENST00000439886 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 KRT40Q6A162 431 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 BRAPQ7Z569 592 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-209ENST00000439886 GBP3Q9H0R5 595 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 RNF40O75150 1001 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 RBL2Q08999 1139 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 VPS16Q9H269 839 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 AKAP2Q9Y2D5 859 aa13.28□□□□□ -0.28
SMPD4-209ENST00000439886 SHC4Q6S5L8 630 aa13.27□□□□□ -0.28
SMPD4-209ENST00000439886 CMTR1Q8N1G2 835 aaKnown RBP13.27□□□□□ -0.28
SMPD4-209ENST00000439886 TC2NQ8N9U0 490 aa13.27□□□□□ -0.28
SMPD4-209ENST00000439886 SLC24A3Q9HC58 644 aa13.27□□□□□ -0.28
SMPD4-209ENST00000439886 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.28
SMPD4-209ENST00000439886 MAPK8IP1Q9UQF2 711 aa13.27□□□□□ -0.28
SMPD4-209ENST00000439886 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.28
SMPD4-209ENST00000439886 IGKV5-2P06315 115 aa13.27□□□□□ -0.29
SMPD4-209ENST00000439886 KIF23Q02241 960 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-209ENST00000439886 FMR1Q06787 632 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMPD4-209ENST00000439886 NUP133Q8WUM0 1156 aa13.27□□□□□ -0.29
SMPD4-209ENST00000439886 N4BP3O15049 544 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 CASP14P31944 242 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 IARSP41252 1262 aaKnown RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 DNA2P51530 1060 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 GCKRQ14397 625 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 TSR1Q2NL82 804 aaKnown RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 SAMM50Q9Y512 469 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 SETQ01105 290 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 SLC39A14Q15043 492 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 BEND6Q5SZJ8 279 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 RSRC2Q7L4I2 434 aaKnown RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 NOA1Q8NC60 698 aaKnown RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 ALDH8A1Q9H2A2 487 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 CEP170BQ9Y4F5 1589 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 RAD9BQ6WBX8 426 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 NCOA7Q8NI08 942 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 NAPGQ99747 312 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-209ENST00000439886 BPIFA3Q9BQP9 254 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 DACH1Q9UI36 760 aa13.26□□□□□ -0.29
SMPD4-209ENST00000439886 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 NEBLO76041 1014 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 CDC25AP30304 524 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 NUTM2AQ8IVF1 878 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-209ENST00000439886 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 RUFY1Q96T51 708 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 ANKZF1Q9H8Y5 726 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 CCDC189A1A4V9 331 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 M0R2C6 588 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 ZEB2O60315 1214 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 SRGAP2O75044 1071 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 ERLIN2O94905 339 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 POSTNQ15063 836 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-209ENST00000439886 EEF2KMTQ96G04 330 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 HAUS7Q99871 368 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms