RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ANGEL1Q9UNK9 670 aaKnown RBP10.32□□□□□ -0.76
COPB1-202ENST00000439561 MAPK8IP1Q9UQF2 711 aa10.32□□□□□ -0.76
COPB1-202ENST00000439561 N4BP1O75113 896 aaKnown RBP10.31□□□□□ -0.76
COPB1-202ENST00000439561 ZRANB2O95218 330 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■■□□□ 13.1
COPB1-202ENST00000439561 DEF6Q9H4E7 631 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 ABCB6Q9NP58 842 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 TBC1D2BQ9UPU7 963 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 ADGRL3Q9HAR2 1447 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 CASP1P29466 404 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 MATR3P43243 847 aaKnown RBP eCLIP10.31□□□□□ -0.76
COPB1-202ENST00000439561 CTR9Q6PD62 1173 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 SLC35F6Q8N357 371 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 MICALL1Q8N3F8 863 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 ACRBPQ8NEB7 543 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 BPIFA3Q9BQP9 254 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 C19orf44Q9H6X5 657 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 MRFAP1Q9Y605 127 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 SH3TC1Q8TE82 1336 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 hCG_1642624A0A1W2PR95 340 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 H0YHG0 523 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 H3BQF6 201 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 EYA2O00167 538 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 ZMYND10O75800 440 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 TDO2P48775 406 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 KIAA1328Q86T90 577 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 DIS3L2Q8IYB7 885 aaKnown RBP10.31□□□□□ -0.76
COPB1-202ENST00000439561 CCDC148Q8NFR7 591 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 SLF1Q9BQI6 1058 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 NAPBQ9H115 298 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 MRPL44Q9H9J2 332 aaKnown RBP10.31□□□□□ -0.76
COPB1-202ENST00000439561 INCENPQ9NQS7 918 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 DENND2AQ9ULE3 1009 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 MTMR7Q9Y216 660 aa10.31□□□□□ -0.76
COPB1-202ENST00000439561 CCDC151A5D8V7 595 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 CUTAO60888 179 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 PPARDQ03181 441 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 BRD3Q15059 726 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 METTL16Q86W50 562 aaKnown RBP10.3□□□□□ -0.76
COPB1-202ENST00000439561 RUFY1Q96T51 708 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 PUS7LQ9H0K6 701 aaKnown RBP10.3□□□□□ -0.76
COPB1-202ENST00000439561 MAN1B1Q9UKM7 699 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 MAP3K9P80192 1104 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 RBL2Q08999 1139 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 SART3Q15020 963 aaKnown RBP10.3□□□□□ -0.76
COPB1-202ENST00000439561 THEMISQ8N1K5 641 aaPredicted RBP10.3□□□□□ -0.76
COPB1-202ENST00000439561 EXOC4Q96A65 974 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 XAGE2Q96GT9 111 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 CABP5Q9NP86 173 aa10.3□□□□□ -0.76
COPB1-202ENST00000439561 ENC1O14682 589 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 TEX33O43247 280 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 GPTP24298 496 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 CDC27P30260 824 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 DNA2P51530 1060 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 FMR1Q06787 632 aaKnown RBP eCLIP10.29□□□□□ -0.763e-7■■■■□ 26.2
COPB1-202ENST00000439561 CHRNA2Q15822 529 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 CCDC70Q6NSX1 233 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 FUT8Q9BYC5 575 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 CASP14P31944 242 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 NAP1L1P55209 391 aaKnown RBP10.29□□□□□ -0.76
COPB1-202ENST00000439561 TTLL7Q6ZT98 887 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 NAPGQ99747 312 aaPredicted RBP10.29□□□□□ -0.76
COPB1-202ENST00000439561 CDC23Q9UJX2 597 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 MINDY4BA8MYZ0 360 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 A1BGP04217 495 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 RRAGBQ5VZM2 374 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 LDHAL6AQ6ZMR3 332 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 FCHSD1Q86WN1 690 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 MLKLQ8NB16 471 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 APPBP2Q92624 585 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 FAM204AQ9H8W3 233 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 AKAP2Q9Y2D5 859 aa10.29□□□□□ -0.76
COPB1-202ENST00000439561 A0A0U1RQJ8 604 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 IFIT5Q13325 482 aaKnown RBP10.28□□□□□ -0.76
COPB1-202ENST00000439561 TC2NQ8N9U0 490 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 ATRIPQ8WXE1 791 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 SLC52A2Q9HAB3 445 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 JADE2Q9NQC1 790 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 TAB2Q9NYJ8 693 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 CTNND2Q9UQB3 1225 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 ITSN1Q15811 1721 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 SYNRGQ9UMZ2 1314 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 ZFYP08048 801 aaPredicted RBP10.28□□□□□ -0.76
COPB1-202ENST00000439561 KCNJ6P48051 423 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 GRIN1Q05586 938 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 CTDSPL2Q05D32 466 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 NR5A1Q13285 461 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 HELBQ8NG08 1087 aaPredicted RBP10.28□□□□□ -0.76
COPB1-202ENST00000439561 WASF1Q92558 559 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 ORAI2Q96SN7 254 aa10.28□□□□□ -0.76
COPB1-202ENST00000439561 EIF5P55010 431 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms