RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 LZTFL1Q9NQ48 299 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 PNMA2Q9UL42 364 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 ARHGEF10O15013 1369 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CTAGE15A4D2H0 777 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 BAG3O95817 575 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CTAGE8P0CG41 777 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CALM1P0DP23 149 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CALM2P0DP24 149 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CALM3P0DP25 149 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 KRT83P78385 493 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 C6orf163Q5TEZ5 329 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CTAGE6Q86UF2 777 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CTAGE4Q8IX94 777 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 MAP4K1Q92918 833 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 DBNDD2Q9BQY9 259 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CWC25Q9NXE8 425 aaPredicted RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 NDUFB9Q9Y6M9 179 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 ZFYVE16Q7Z3T8 1539 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 ABCA6Q8N139 1617 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 N4BP3O15049 544 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 ZBTB43O43298 467 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 SNRPA1P09661 255 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 ERMNQ8TAM6 284 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 LMBR1Q8WVP7 490 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 DDX21Q9NR30 783 aaKnown RBP eCLIP7.17□□□□□ -1.26
BDNF-211ENST00000439476 PICK1Q9NRD5 415 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 PUF60Q9UHX1 559 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 PNPLA6Q8IY17 1366 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 GSTTP1A0A1W2PQM5 241 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 MYO1CO00159 1063 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 RNF113AO15541 343 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 ZNF202O95125 648 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 EIF4A1P60842 406 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 GSTO1P78417 241 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 PPP2R3AQ06190 1150 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 SETDB1Q15047 1291 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 TDRD12Q587J7 1177 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 TRIM74Q86UV6 250 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 TRIM73Q86UV7 250 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 DZIP1Q86YF9 867 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 IFNL2Q8IZJ0 200 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 STRN4Q9NRL3 753 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 VPS18Q9P253 973 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 G3BP2Q9UN86 482 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 CFAP74Q9C0B2 1584 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 HSF2BPO75031 334 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 IL15P40933 162 aaPredicted RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 NLRP12P59046 1061 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 NCBP1Q09161 790 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 TNNI3KQ59H18 835 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 BEND3Q5T5X7 828 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 ANO1Q5XXA6 986 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 KRBA2Q6ZNG9 492 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 CCDC155Q8N6L0 562 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 PPM1EQ8WY54 764 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 SELENOOQ9BVL4 669 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 ABCF2Q9UG63 623 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 FPGT-TNNI3KV9GXZ4 949 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 ATP7BP35670 1465 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 MYO1BO43795 1136 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 NAT1P18440 290 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 CALML3P27482 149 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 CA8P35219 290 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 AFMP43652 599 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 CEBPAP49715 358 aaPredicted RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 MNAT1P51948 309 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 MFSD6Q6ZSS7 791 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 CXorf38Q8TB03 319 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 PI4K2BQ8TCG2 481 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 THOC1Q96FV9 657 aaKnown RBP7.17□□□□□ -1.26
BDNF-211ENST00000439476 TTC14Q96N46 770 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 MAF1Q9H063 256 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 KIAA1468Q9P260 1216 aa7.17□□□□□ -1.26
BDNF-211ENST00000439476 KAT6BQ8WYB5 2073 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 CTAGE9A4FU28 777 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 MINDY4BA8MYZ0 360 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 PHACTR2O75167 634 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 GNAT2P19087 354 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 ETF1P62495 437 aaKnown RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 KRI1Q8N9T8 703 aaKnown RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 CCDC77Q9BR77 488 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 MTA3Q9BTC8 594 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 HELLSQ9NRZ9 838 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 TNRQ92752 1358 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 PSMA7O14818 248 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 RNMTO43148 476 aaKnown RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 CDC25BP30305 580 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 TIMM10P62072 90 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 CCDC40Q4G0X9 1142 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 C11orf57Q6ZUT1 292 aaPredicted RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 RASAL2Q9UJF2 1139 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 IQGAP1P46940 1657 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 EFCAB6Q5THR3 1501 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 CDK12Q9NYV4 1490 aaPredicted RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 PLEKHG3A1L390 1219 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 ARHGAP6O43182 974 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 TACC1O75410 805 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 RHOXF2BP0C7M4 288 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms